Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 232 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 522 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 522 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 139 bp overlap

CBX2 1 dataset

ChIP K-562 ENCSR000ATU.CBX2.K-562 319 bp overlap

CHD2 1 dataset

ChIP H1 ENCFF991MKH 125 bp overlap

CHD7 1 dataset

ChIP H1 ENCFF126NLU 207 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 304 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

EZH2 1 dataset

ChIP SF8628 GSE94834.EZH2.SF8628 437 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 522 bp overlap

ChIP DE DE-FOXA2-2 514 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 522 bp overlap

ChIP DE DE-GATA4-2 522 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 522 bp overlap

ChIP DE DE-GATA6-2 522 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 522 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 522 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 522 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 440 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 522 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 522 bp overlap

IKZF1 2 datasets

ChIP K-562 ENCSR395HWC.IKZF1.K-562 384 bp overlap

ChIP K562 ENCFF348IBL 375 bp overlap

JUN 7 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 522 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 522 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 522 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 328 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 90 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 89 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 522 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 352 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MZF1 1 dataset

Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 311 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 129 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 475 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 316 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 360 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 95 bp overlap

NKX2-1 1 dataset

ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 92 bp overlap

POLR2A 4 datasets

ChIP GM23338 ENCFF450WCS 293 bp overlap

ChIP H1 ENCFF566JSR 441 bp overlap

ChIP H1 ENCFF566JSR 239 bp overlap

ChIP H1 ENCFF833NJP 257 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 522 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 290 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 227 bp overlap

REST 3 datasets

Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap

ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 74 bp overlap

ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 63 bp overlap

SMAD2 3 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 352 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 426 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 329 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 59 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 522 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 522 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 522 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 522 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 522 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 522 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 522 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 522 bp overlap

SMAD3 2 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 177 bp overlap

ChIP endoderm GSE29422.SMAD3.endoderm 282 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 300 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 456 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 97 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 69 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 160 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 158 bp overlap

ChIP DE_D1 S10-DE-d1-BAF155-exp1 271 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 462 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 85 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 362 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 372 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 231 bp overlap

SUPT5H 2 datasets

ChIP HeLa GSE125534.SUPT5H.HeLa 522 bp overlap

ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 196 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 85 bp overlap

TBP 2 datasets

ChIP hESC GSE122298.TBP.hESC 59 bp overlap

ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 165 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 333 bp overlap

TEAD4 5 datasets

ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 94 bp overlap

ChIP ESC S26-ESC-d0-TEAD4-exp1 167 bp overlap

ChIP H1 ENCFF778PAX 63 bp overlap

ChIP SNU-216 GSE44416.TEAD4.SNU-216 95 bp overlap

ChIP WTC11 ENCFF114TZS 132 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 236 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

YY1 1 dataset

ChIP H1 ENCFF524BTL 103 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 53 bp overlap

ZNF768 1 dataset

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

Gene	Dist. to TSS	Distance	Link type
GPR78	12.2 kb	Distal	Multiome
TRMT44	127.4 kb	Distal	Multiome
ACOX3	139.8 kb	Distal	Multiome
ENSG00000251615	209.9 kb	Distal	Multiome

Genome Browser