chr3 : 181,741,539 181,741,878
339 bp 46 TFs 0 linked genes
This 339 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:181,736,539 – 181,746,878
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 338 bp overlap
BRD4 1 dataset
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 130 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 279 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 339 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 199 bp overlap
DAXX 1 dataset
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 130 bp overlap
DPF2 3 datasets
ChIP BIN-67 GSE117734.DPF2.BIN-67 133 bp overlap
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 339 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 339 bp overlap
ESR1 7 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 195 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 192 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 143 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 339 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 325 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 309 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 267 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 307 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 262 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 263 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 313 bp overlap
FOXA1 2 datasets
ChIP liver ERP002306.FOXA1.liver 233 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 185 bp overlap
FOXA2 2 datasets
ChIP liver ENCSR080XEY.FOXA2.liver 147 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 180 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 230 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF354NRH 339 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 173 bp overlap
KMT2C 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 331 bp overlap
KMT2D 2 datasets
ChIP BIN-67_ctrl GSE117734.KMT2D.BIN-67_ctrl 294 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 264 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 216 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 126 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 231 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 314 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 284 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 237 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 153 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 319 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 221 bp overlap
ChIP liver ERP002306.ONECUT1.liver 181 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 339 bp overlap
ONECUT2 2 datasets
ChIP Hep-G2 ENCSR661PKJ.ONECUT2.Hep-G2 199 bp overlap
ChIP HepG2 ENCFF460COO 289 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 339 bp overlap
PGR 1 dataset
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 266 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 133 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 275 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 275 bp overlap
RARA 3 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 309 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 316 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 189 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 154 bp overlap
ChIP liver ENCFF807CIA 153 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 339 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 241 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 339 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 339 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 327 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 339 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 224 bp overlap
SMARCC1 4 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 163 bp overlap
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 239 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 232 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 237 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 249 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 215 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 94 bp overlap
SPI1 1 dataset
ChIP DC_LPS GSE123347.SPI1.DC_LPS 105 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 339 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 173 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF384 1 dataset
ChIP HEK293T ENCFF019DZX 64 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap