chr3 : 168,086,692 168,087,103
411 bp 49 TFs 2 linked genes
This 411 bp open chromatin element is linked to ENSG00000286994 and GOLIM4 and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000286994 8.0 kb Proximal Proximity
GOLIM4 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:168,081,692 – 168,092,103
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 136 bp overlap
BCL11A 2 datasets
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 83 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 106 bp overlap
BRD4 1 dataset
ChIP CHL-1 GSE95585.BRD4.CHL-1 411 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 322 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 253 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 411 bp overlap
CTCF 1 dataset
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 249 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 285 bp overlap
ChIP K562 ENCFF739JDE 346 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF829RWA 244 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 134 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 101 bp overlap
ChIP neural cell ENCFF442QNK 257 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 169 bp overlap
ESR1 1 dataset
ChIP T-47D ENCSR000BQD.ESR1.T-47D 249 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 254 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 167 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 225 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 231 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 81 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 99 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 203 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 156 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 156 bp overlap
ChIP erythroblast ENCFF867JAR 395 bp overlap
ChIP erythroblast ENCFF867JAR 411 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 354 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 182 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 195 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 108 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 169 bp overlap
GATA4 3 datasets
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 164 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 238 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 107 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 257 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 199 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 115 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 247 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 324 bp overlap
ChIP K562 ENCFF055GAZ 411 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 122 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 133 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 254 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 223 bp overlap
MEF2B 1 dataset
ChIP DLBCL GSE110682.MEF2B.DLBCL 314 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 353 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 234 bp overlap
ChIP K562 ENCFF320GSD 154 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 245 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 254 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 231 bp overlap
ChIP K562 ENCFF286KMN 282 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 338 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 215 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 256 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 325 bp overlap
ChIP K562 ENCFF236IUS 308 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 219 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 218 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 312 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 98 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 260 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 321 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 402 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 109 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 319 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 325 bp overlap
TAL1 1 dataset
ChIP CD34 GSE52924.TAL1.CD34 121 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 165 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 140 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 140 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 256 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 411 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 242 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 337 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 228 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 355 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 327 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 148 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 324 bp overlap
ZNF316 3 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 235 bp overlap
ChIP K562 ENCFF281INV 334 bp overlap
ChIP K562 ENCFF281INV 127 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 214 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 321 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 218 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 322 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 211 bp overlap