chr3 : 152,263,402 152,264,062
660 bp 63 TFs 2 linked genes
This 660 bp open chromatin element is linked to MBNL1 and MBNL1-AS1 and is bound by 63 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MBNL1 4.8 kb Proximal Proximity
MBNL1-AS1 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:152,258,402 – 152,269,062
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP L826 GSE83671.AFF1.L826 366 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 241 bp overlap
ChIP K562 ENCFF938UXQ 219 bp overlap
BRD4 4 datasets
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 70 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 209 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 233 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 582 bp overlap
Bcl11B 1 dataset
Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 270 bp overlap
ChIP K562 ENCFF673OEZ 118 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 235 bp overlap
CHAMP1 1 dataset
ChIP K562 ENCFF860ZIW 457 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 179 bp overlap
ChIP K562 ENCFF053BWO 357 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 302 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 124 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 446 bp overlap
ChIP DE DE-FOXA2-2 532 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA1 12 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 73 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 140 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 258 bp overlap
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 113 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 130 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 179 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 184 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 190 bp overlap
ChIP erythroblast ENCFF867JAR 96 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 474 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 273 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 596 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 175 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 535 bp overlap
ChIP DE DE-GATA4-2 596 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 501 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 376 bp overlap
GATA6 9 datasets
ChIP AGS GSE51705.GATA6.AGS 269 bp overlap
ChIP DE DE-GATA6-1 521 bp overlap
ChIP DE DE-GATA6-2 660 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 446 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 439 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 645 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 569 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 440 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 413 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF968WBH 521 bp overlap
JUND 1 dataset
ChIP Kasumi-1_RUNX1-KO GSE117105.JUND.Kasumi-1_RUNX1-KO 142 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 365 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 236 bp overlap
KLF1 1 dataset
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
KMT2A 7 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 660 bp overlap
ChIP L826 GSE83671.KMT2A.L826 114 bp overlap
ChIP L826 GSE83671.KMT2A.L826 330 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 640 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 260 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 295 bp overlap
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 286 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 489 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 660 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap
MEN1 3 datasets
ChIP MOLM-13_EPZ5676 GSE149183.MEN1.MOLM-13_EPZ5676 382 bp overlap
ChIP MOLM-13_compound10 GSE149183.MEN1.MOLM-13_compound10 184 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 95 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
MLLT1 2 datasets
ChIP MV4-11 GSE82116.MLLT1.MV4-11 328 bp overlap
ChIP MV4-11 GSE82116.MLLT1.MV4-11 231 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 153 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 298 bp overlap
PBX3 1 dataset
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 101 bp overlap
RREB1 1 dataset
Motif DE_36h DE_36h-RREB1_MA0073.2 19 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 342 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 300 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 360 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 456 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 152 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 483 bp overlap
SREBF1 1 dataset
Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap
Smad4 1 dataset
Motif DE_36h DE_36h-Smad4_MA1153.2 7 bp overlap
TAL1 5 datasets
ChIP CD34 GSE52924.TAL1.CD34 126 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 114 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 202 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 219 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 135 bp overlap
TRIM24 4 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 556 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 355 bp overlap
ChIP K562 ENCFF284DKY 345 bp overlap
ChIP K562 ENCFF616RIL 390 bp overlap
XRCC3 1 dataset
ChIP K562 ENCFF536TLC 271 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 155 bp overlap
ChIP K562 ENCFF875HLX 200 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 438 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 155 bp overlap
ZNF316 3 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 480 bp overlap
ChIP K562 ENCFF281INV 446 bp overlap
ChIP K562 ENCFF838QCD 211 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 159 bp overlap
ZNF707 2 datasets
Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap
Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap
ZNF740 1 dataset
Motif DE_36h DE_36h-ZNF740_MA0753.3 10 bp overlap