Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

39 transcription factors

ARNT 1 dataset

ChIP 501-mel GSE95280.ARNT.501-mel 194 bp overlap

BRD4 3 datasets

ChIP COLO-741 GSE73319.BRD4.COLO-741 194 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 194 bp overlap

ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 105 bp overlap

CDK9 1 dataset

ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 208 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 220 bp overlap

CTCF 10 datasets

ChIP HAP1 GSE152721.CTCF.HAP1 64 bp overlap

ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 102 bp overlap

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 117 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 75 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 93 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 105 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 150 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 123 bp overlap

ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 127 bp overlap

ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 180 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 228 bp overlap

E2F6 2 datasets

ChIP WA01 ENCSR000BSI.E2F6.WA01 117 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 176 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 243 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 224 bp overlap

HNF4A 5 datasets

ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 159 bp overlap

ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 259 bp overlap

ChIP liver ENCFF354NRH 149 bp overlap

ChIP liver ENCFF449HPV 139 bp overlap

ChIP liver ERP002306.HNF4A.liver 129 bp overlap

KMT2C 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 193 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 84 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 196 bp overlap

MYC 1 dataset

ChIP OVCAR-3 GSE154941.MYC.OVCAR-3 221 bp overlap

MYCN 2 datasets

ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 196 bp overlap

ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 181 bp overlap

MYOG 1 dataset

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 206 bp overlap

NANOG 10 datasets

ChIP GM23338 ENCFF065NZG 230 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 216 bp overlap

ChIP H1 ENCFF747ZPQ 201 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 355 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 380 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 202 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 380 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 380 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 278 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 228 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 131 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 210 bp overlap

POU5F1 9 datasets

ChIP GM23338 ENCFF333SNB 173 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 380 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 204 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 162 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 168 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 369 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 327 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 311 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 167 bp overlap

REST 1 dataset

ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 145 bp overlap

SMARCA4 3 datasets

ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 213 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 380 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 221 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 305 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 158 bp overlap

SMARCC1 3 datasets

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 352 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 366 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 242 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 281 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 136 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 143 bp overlap

TEAD1 1 dataset

ChIP MSTO GSE68170.TEAD1.MSTO 198 bp overlap

TEAD4 3 datasets

ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 124 bp overlap

ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 109 bp overlap

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 249 bp overlap

TP53 1 dataset

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 263 bp overlap

TRIM28 2 datasets

ChIP AF22 GSE84259.TRIM28.AF22 262 bp overlap

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 245 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 307 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 182 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 251 bp overlap

ZNF425 1 dataset

ChIP WTC11 ENCFF359IXT 301 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 248 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 328 bp overlap

ZNF92 1 dataset

ChIP retina_pigment GSE60024.ZNF92.retina_pigment 69 bp overlap

ZSCAN18 1 dataset

ChIP WTC11 ENCFF867QWX 257 bp overlap

Genome Browser