chr3 : 77,524,510 77,524,815
305 bp 50 TFs 0 linked genes
This 305 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:77,519,510 – 77,529,815
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.AR.LNCaP_FENG_shFOXA1_Ethanol 241 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 234 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
BCL6B 2 datasets
ChIP HEK293 ENCFF555YRB 305 bp overlap
ChIP HEK293 ENCSR673SGK.BCL6B.HEK293 284 bp overlap
CTBP1 2 datasets
ChIP HEK293T ENCFF003PDY 256 bp overlap
ChIP HEK293T ENCSR237TFX.CTBP1.HEK293T 236 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 305 bp overlap
ESR1 8 datasets
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 122 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 274 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 170 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 214 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 192 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 305 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 103 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 149 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 305 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 284 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 305 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 247 bp overlap
FOXA1 8 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 175 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 192 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 169 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 157 bp overlap
ChIP HEK293T ENCSR094WHO.FOXA1.HEK293T 185 bp overlap
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 305 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 236 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 305 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 305 bp overlap
ChIP DE DE-FOXA2-2 305 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 305 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 305 bp overlap
ChIP DE DE-GATA4-2 305 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 305 bp overlap
ChIP DE DE-GATA6-2 305 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 260 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 218 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 159 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 140 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 191 bp overlap
MAFF 5 datasets
ChIP HeLa-S3 ENCFF783SBT 157 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 113 bp overlap
ChIP HepG2 ENCFF452YUT 119 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 120 bp overlap
ChIP K562 ENCFF071YKK 180 bp overlap
MAFK 13 datasets
ChIP A549 ENCFF371EPR 225 bp overlap
ChIP H1 ENCFF854XWE 179 bp overlap
ChIP HeLa-S3 ENCFF304XGR 183 bp overlap
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 133 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 152 bp overlap
ChIP HepG2 ENCFF743ZOF 113 bp overlap
ChIP HepG2 ENCFF767LDG 164 bp overlap
ChIP IMR-90 ENCFF336DHZ 97 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 104 bp overlap
ChIP K562 ENCFF380WHM 170 bp overlap
ChIP MCF-7 ENCFF558JLG 211 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 194 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 166 bp overlap
MAX 3 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 258 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 165 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 164 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 198 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 211 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 155 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 305 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 207 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 125 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 300 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 305 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 305 bp overlap
ChIP hESC GSE18292.NANOG.hESC 305 bp overlap
ChIP hESC GSE20650.NANOG.hESC 228 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 305 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 305 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 201 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 305 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 288 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 305 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 305 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 300 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 289 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 305 bp overlap
SMARCA4 4 datasets
ChIP NSC GSE125033.SMARCA4.NSC 146 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 305 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 305 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 305 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 305 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 178 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 305 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 276 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 266 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 304 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 291 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 237 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 305 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 305 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 198 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 305 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 305 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 218 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 272 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 289 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 135 bp overlap