chr3 : 21,783,956 – 21,784,345
389 bp 55 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:21,778,956 – 21,789,345
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 235 bp overlap
ChIP K562 ENCFF938UXQ 225 bp overlap
BHLHE40 2 datasets
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 171 bp overlap
ChIP K562 ENCFF923NJI 240 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 231 bp overlap
ChIP K562 ENCFF963TXY 158 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 254 bp overlap
ChIP K562 ENCFF673OEZ 223 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 137 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 117 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 113 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 251 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 377 bp overlap
ChIP DE DE-FOXA2-2 389 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 157 bp overlap
GATA1 10 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 91 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 137 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 193 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 68 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 209 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 249 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 237 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 320 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 225 bp overlap
ChIP erythroid_R3R4 GSE43625.GATA1.erythroid_R3R4 66 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 179 bp overlap
ChIP K562 ENCFF544PCK 212 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 162 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 347 bp overlap
ChIP DE DE-GATA4-2 339 bp overlap
ChIP G296S GSE85628.GATA4.G296S 253 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 253 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 287 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 265 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 368 bp overlap
ChIP DE DE-GATA6-2 351 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 354 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 348 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 329 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 306 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 388 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 284 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 241 bp overlap
GFI1B 5 datasets
ChIP CD34 GSE52924.GFI1B.CD34 197 bp overlap
ChIP K-562 ENCSR509GDT.GFI1B.K-562 157 bp overlap
ChIP K-562 GSE117944.GFI1B.K-562 155 bp overlap
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 127 bp overlap
ChIP SET-2 GSE121424.GFI1B.SET-2 122 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 207 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 159 bp overlap
ChIP K562 ENCFF968WBH 187 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 204 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 226 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 141 bp overlap
ChIP K562 ENCFF744ALD 185 bp overlap
HMG20A 1 dataset
ChIP K562 ENCFF840WDB 373 bp overlap
Hand1::Tcf3 3 datasets
Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_48h DE_48h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap
KDM1A 8 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 240 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 234 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 154 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 174 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 181 bp overlap
ChIP K562 ENCFF128TYE 182 bp overlap
ChIP K562 ENCFF133OLU 188 bp overlap
ChIP K562 ENCFF934ZRG 316 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 222 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 181 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 241 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 155 bp overlap
MEF2A 1 dataset
ChIP K-562 ENCSR000BNV.MEF2A.K-562 121 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 218 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 317 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR910JAI.NCOR1.K-562 193 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 133 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 131 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 197 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 286 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 234 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 102 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 105 bp overlap
RUNX1 2 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 124 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 124 bp overlap
SMAD2 4 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 173 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 330 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 270 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 314 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 346 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 189 bp overlap
STAT5A 1 dataset
ChIP K-562 ENCSR000BRR.STAT5A.K-562 179 bp overlap
Six4 3 datasets
Motif DE_36h DE_36h-Six4_MA2001.2 7 bp overlap
Motif DE_48h DE_48h-Six4_MA2001.2 7 bp overlap
Motif DE_60h DE_60h-Six4_MA2001.2 7 bp overlap
TAL1 16 datasets
ChIP CD34 GSE52924.TAL1.CD34 210 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 227 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 219 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 243 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 262 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 212 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 218 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 234 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 228 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 222 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 241 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 208 bp overlap
ChIP K562 ENCFF620GMX 218 bp overlap
ChIP K562 ENCFF661CCK 77 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 210 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 197 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 218 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 230 bp overlap
ChIP K562 ENCFF931DJY 185 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 222 bp overlap
ChIP K562 ENCFF319QZT 132 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 205 bp overlap
TRIM28 1 dataset
ChIP K-562 ENCSR000BRW.TRIM28.K-562 157 bp overlap
ZBTB32 2 datasets
Motif DE_36h DE_36h-ZBTB32_MA1580.1 10 bp overlap
Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap
ZNF547 3 datasets
Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap
Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap
Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap
ZNF75A 2 datasets
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 2 datasets
Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
Zfp335 3 datasets
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 3 datasets
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_48h DE_48h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 3 datasets
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_48h DE_48h-Zic3_MA0697.3 7 bp overlap
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
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