Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

ATRX 1 dataset

ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 535 bp overlap

BRD4 8 datasets

ChIP CHL-1 GSE95585.BRD4.CHL-1 553 bp overlap

ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 553 bp overlap

ChIP CHL-1_OTX015 GSE95585.BRD4.CHL-1_OTX015 280 bp overlap

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 232 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 419 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 498 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 280 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 320 bp overlap

CHD7 2 datasets

ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 177 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 553 bp overlap

CREBBP 1 dataset

ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 224 bp overlap

E2F1 1 dataset

ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 344 bp overlap

ESR1 2 datasets

ChIP MCF-7 GSE68356.ESR1.MCF-7 208 bp overlap

ChIP MCF-7_ethanol_MKL1D200 GSE107476.ESR1.MCF-7_ethanol_MKL1D200 291 bp overlap

EZH2 1 dataset

ChIP THP-1 GSE135024.EZH2.THP-1 273 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 465 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 225 bp overlap

GATA2 1 dataset

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 405 bp overlap

GATA4 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 276 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 348 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 259 bp overlap

MED1 1 dataset

ChIP RH4 GSE83726.MED1.RH4 202 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 367 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 408 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 497 bp overlap

MYC 1 dataset

ChIP NB69 GSE138295.MYC.NB69 388 bp overlap

MYOD1 2 datasets

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 311 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 216 bp overlap

MYOG 3 datasets

ChIP RH4 GSE83726.MYOG.RH4 206 bp overlap

ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 197 bp overlap

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 181 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 228 bp overlap

OLIG2 1 dataset

ChIP brain-prefrontal-cortex_2017025 GSE129039.OLIG2.brain-prefrontal-cortex_2017025 256 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 330 bp overlap

PDX1 2 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 284 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 121 bp overlap

PGR 1 dataset

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 296 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 428 bp overlap

POLR2A 3 datasets

ChIP adrenal gland ENCFF843OBJ 472 bp overlap

ChIP neural cell ENCFF604SPB 385 bp overlap

ChIP thyroid gland ENCFF979LRR 463 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 192 bp overlap

RAD21 4 datasets

ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 129 bp overlap

ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap

ChIP neural ENCSR198ZYJ.RAD21.neural 553 bp overlap

ChIP neural cell ENCFF564MOT 128 bp overlap

RBBP4 2 datasets

ChIP RH5 GSE155861.RBBP4.RH5 271 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 349 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 192 bp overlap

RELA 1 dataset

ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 153 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 553 bp overlap

ChIP neural cell ENCFF882LXX 246 bp overlap

SMAD3 1 dataset

ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 239 bp overlap

SMARCA4 5 datasets

ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 220 bp overlap

ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 379 bp overlap

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 552 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 233 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 311 bp overlap

SMC3 2 datasets

ChIP neural ENCSR404BPV.SMC3.neural 553 bp overlap

ChIP neural cell ENCFF795YGY 492 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 553 bp overlap

ChIP RENVM GSE49404.SOX2.RENVM 210 bp overlap

SOX8 2 datasets

ChIP RH4 GSE116344.SOX8.RH4 244 bp overlap

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 294 bp overlap

SPIB 1 dataset

ChIP OCI-Ly3_SHSPIB GSE56857.SPIB.OCI-Ly3_SHSPIB 224 bp overlap

TBP 1 dataset

ChIP WA01 ENCSR000ECB.TBP.WA01 176 bp overlap

TEAD1 1 dataset

ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 282 bp overlap

TEAD4 1 dataset

ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 216 bp overlap

TP53 1 dataset

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 488 bp overlap

ZEB1 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 117 bp overlap

ZFX 2 datasets

ChIP MCF-7 GSE102616.ZFX.MCF-7 354 bp overlap

ChIP MCF-7 ENCSR435OQD.ZFX.MCF-7 315 bp overlap

Genome Browser