chr2 : 224,466,416 224,466,783
367 bp 41 TFs 0 linked genes
This 367 bp open chromatin element has no linked target genes and is bound by 41 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:224,461,416 – 224,471,783
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 260 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 251 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 120 bp overlap
ATF2 1 dataset
ChIP HEK293 ENCFF194VKZ 67 bp overlap
BRD4 8 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 103 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 97 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 164 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 277 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 367 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 52 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 367 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 300 bp overlap
CTCF 3 datasets
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 142 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 300 bp overlap
ChIP neural cell ENCFF335ADI 367 bp overlap
EBF1 2 datasets
ChIP MUTUL GSE75503.EBF1.MUTUL 208 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 206 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 367 bp overlap
ChIP neural cell ENCFF442QNK 255 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 147 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 249 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 123 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 145 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 286 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 229 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 134 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 262 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 307 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 269 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 273 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 154 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 178 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 205 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 367 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 224 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 141 bp overlap
RAD21 1 dataset
ChIP neural cell ENCFF564MOT 367 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 94 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 189 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 273 bp overlap
ChIP neural cell ENCFF882LXX 324 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 138 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 153 bp overlap
SMC3 3 datasets
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 173 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 367 bp overlap
ChIP neural cell ENCFF795YGY 330 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 203 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 301 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 367 bp overlap
WT1 3 datasets
ChIP HEK293 ENCFF906HIR 108 bp overlap
ChIP HEK293 ENCFF906HIR 310 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 312 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 249 bp overlap
ZNF343 1 dataset
ChIP HEK293T GSE78099.ZNF343.HEK293T 138 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 100 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 106 bp overlap