chr2 : 212,677,365 – 212,677,895

530 bp 60 TFs 0 linked genes

This 530 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

E2F6 1 dataset

Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap

E4F1 1 dataset

ChIP GM12878 ENCSR439WAF.E4F1.GM12878 331 bp overlap

EBF1 2 datasets

Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap

Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap

EBF3 2 datasets

Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap

Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap

ETS1 1 dataset

Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap

ETS2 1 dataset

Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap

ETV1 2 datasets

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

Ebf4 2 datasets

Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap

Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FLI1 1 dataset

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 175 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 262 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

HSF1 1 dataset

ChIP MO91 GSE45852.HSF1.MO91 231 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

MEIS1 4 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MYOG 1 dataset

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

MZF1 1 dataset

Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap

NANOG 1 dataset

ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap

NFE2L2 1 dataset

ChIP HAEC_oxpapc_4h GSE89970.NFE2L2.HAEC_oxpapc_4h 144 bp overlap

NKX2-4 3 datasets

Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap

Motif DE_24h DE_24h-NKX2-4_MA2003.2 8 bp overlap

Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap

NKX2-8 3 datasets

Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap

Motif DE_24h DE_24h-NKX2-8_MA0673.2 8 bp overlap

Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap

NR3C1 2 datasets

ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 291 bp overlap

ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 70 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nkx2-1 3 datasets

Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap

Motif DE_24h DE_24h-Nkx2-1_MA1994.2 7 bp overlap

Motif ES_0h ES_0h-Nkx2-1_MA1994.2 7 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PBX1 1 dataset

ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 318 bp overlap

PGR 1 dataset

Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap

RAD21 1 dataset

ChIP RH4 GSE83726.RAD21.RH4 177 bp overlap

RUNX1T1 2 datasets

ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 326 bp overlap

ChIP Kasumi-1_shTAF1-AE GSE115115.RUNX1T1.Kasumi-1_shTAF1-AE 247 bp overlap

Rarg 2 datasets

Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap

Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap

Runx1 4 datasets

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap

Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 241 bp overlap

SOX8 1 dataset

ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 165 bp overlap

TBP 1 dataset

ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 230 bp overlap

TCF12 1 dataset

ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 178 bp overlap

TCF3 2 datasets

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 228 bp overlap

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 320 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TEAD4 1 dataset

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

THRA 2 datasets

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap

THRB 2 datasets

Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap

Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZKSCAN1 1 dataset

ChIP MCF-7 ENCSR449UFF.ZKSCAN1.MCF-7 124 bp overlap

ZNF148 1 dataset

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ZNF175 1 dataset

Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap

ZNF184 1 dataset

Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 79 bp overlap

ZNF512 1 dataset

ChIP WTC11 ENCFF086TTM 243 bp overlap

ZNF530 2 datasets

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

ZNF816 2 datasets

Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap

Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap

ZNF85 1 dataset

Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap