chr2 : 201,865,976 201,866,316
340 bp 51 TFs 0 linked genes
This 340 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:201,860,976 – 201,871,316
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
BRD2 4 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 98 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 189 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 138 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 138 bp overlap
BRD4 4 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 181 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 181 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 265 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 265 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 215 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 147 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 340 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 188 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 154 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 201 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 172 bp overlap
ERG 9 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 245 bp overlap
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 130 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 290 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 234 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 278 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 204 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 180 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 324 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 194 bp overlap
ESR1 4 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 157 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 238 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 238 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 303 bp overlap
FOXA1 7 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 169 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 183 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 142 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 89 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 182 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 184 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 340 bp overlap
FOXA2 11 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 260 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 191 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 191 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 109 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 340 bp overlap
ChIP DE DE-FOXA2-1 340 bp overlap
ChIP DE DE-FOXA2-2 340 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 340 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 310 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 340 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 340 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 128 bp overlap
GATA2 2 datasets
ChIP endothelial cell of umbilical vein ENCFF148NLK 324 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 340 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 303 bp overlap
GATA4 9 datasets
ChIP A-549 GSE85002.GATA4.A-549 340 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 320 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 248 bp overlap
ChIP DE DE-GATA4-1 340 bp overlap
ChIP DE DE-GATA4-2 340 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 269 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 280 bp overlap
ChIP foregut GSE117136.GATA4.foregut 340 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 340 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 340 bp overlap
ChIP AGS GSE51936.GATA6.AGS 242 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 340 bp overlap
ChIP DE DE-GATA6-1 340 bp overlap
ChIP DE DE-GATA6-2 340 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 340 bp overlap
ChIP H9 ERP004206.GATA6.H9 320 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 281 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 163 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 340 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 273 bp overlap
ChIP foregut GSE117136.GATA6.foregut 340 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 297 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 340 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 340 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 340 bp overlap
GFI1 1 dataset
ChIP HepG2 ENCFF472INF 340 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 146 bp overlap
HNF1B 4 datasets
ChIP H9 ERP004206.HNF1B.H9 340 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 284 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 189 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 230 bp overlap
HNF4A 2 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 180 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 308 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 229 bp overlap
JUN 2 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 129 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 184 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 340 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 340 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 281 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 264 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 165 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 306 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 243 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 141 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 203 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 136 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 279 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 139 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 203 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 340 bp overlap
POLR2A 2 datasets
ChIP stomach ENCFF607ZPU 283 bp overlap
ChIP stomach ENCFF820WZN 338 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 220 bp overlap
RELA 8 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 222 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 205 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 150 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 236 bp overlap
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 229 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 226 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 157 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 180 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 163 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 78 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 340 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 220 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 207 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 181 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 187 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 155 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 326 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 297 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 296 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 137 bp overlap
TEAD1 3 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 260 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 340 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 340 bp overlap
TEAD4 6 datasets
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 274 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 340 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 252 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 311 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 315 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 186 bp overlap
YAP1 1 dataset
ChIP MDA-MB-231 GSE66081.YAP1.MDA-MB-231 248 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 321 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 237 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 95 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 255 bp overlap
ZSCAN30 1 dataset
ChIP HepG2 ENCFF093LBM 263 bp overlap