chr2 : 138,917,102 – 138,917,971
869 bp 57 TFs 1 linked gene
This 869 bp open chromatin element is linked to ENSG00000287147 and is bound by 57 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287147 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:138,912,102 – 138,922,971
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP WA01 ENCSR000BKC.ATF3.WA01 132 bp overlap
Ascl2 3 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif DE_24h DE_24h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 191 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 194 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 117 bp overlap
CTCF 100 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 122 bp overlap
ChIP Caco-2 ENCFF753NZV 394 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA0139.2 15 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 102 bp overlap
ChIP GM23338 ENCFF531QOI 221 bp overlap
ChIP GM23338 ENCFF772DML 101 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 160 bp overlap
ChIP H1 ENCFF764RHO 196 bp overlap
ChIP H9 ENCFF152GTF 290 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 196 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 296 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 234 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 253 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 283 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 289 bp overlap
ChIP HCT116 ENCFF003KHP 143 bp overlap
ChIP HCT116 ENCFF209YMI 246 bp overlap
ChIP HCT116 ENCFF373YMA 300 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 89 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 87 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 245 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 161 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 283 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 264 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 163 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 201 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 159 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 190 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 200 bp overlap
ChIP HepG2 ENCFF127KUP 229 bp overlap
ChIP HepG2 ENCFF194VBQ 241 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 130 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 195 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 217 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 211 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 221 bp overlap
ChIP MCF-7 ENCFF139NQI 121 bp overlap
ChIP MCF-7 ENCFF162GNE 150 bp overlap
ChIP MCF-7 ENCFF198DQX 228 bp overlap
ChIP MCF-7 ENCFF210JUZ 315 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 228 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 260 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 227 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 251 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 217 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 203 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 158 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 127 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 163 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 240 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 254 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 254 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 194 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 133 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 216 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 242 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 154 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 223 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 174 bp overlap
ChIP WTC11 ENCFF658QVH 370 bp overlap
ChIP endodermal cell ENCFF471YCZ 291 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 134 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 253 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 314 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 308 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 171 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 203 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 172 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 211 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 216 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 211 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 172 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 226 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 255 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 258 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 209 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 287 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 217 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 224 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 175 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 227 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 193 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 346 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 422 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 250 bp overlap
EBF3 2 datasets
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap
ELF1 6 datasets
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 180 bp overlap
ChIP HepG2 ENCFF838BCU 277 bp overlap
ChIP MCF-7 ENCFF305BNP 361 bp overlap
ChIP MCF-7 ENCFF687CWI 343 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 179 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 210 bp overlap
ELF2 2 datasets
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
Motif ES_0h ES_0h-ELF2_MA1483.3 10 bp overlap
ELF4 2 datasets
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
Motif ES_0h ES_0h-ELF4_MA0641.1 12 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif ES_0h ES_0h-ELK1HOXA1_MA1931.1 14 bp overlap
ELK1::HOXB13 2 datasets
Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap
Motif ES_0h ES_0h-ELK1HOXB13_MA1932.2 15 bp overlap
ELK3 2 datasets
Motif DE_12h DE_12h-ELK3_MA0759.3 9 bp overlap
Motif ES_0h ES_0h-ELK3_MA0759.3 9 bp overlap
ELK4 2 datasets
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
Motif ES_0h ES_0h-ELK4_MA0076.3 9 bp overlap
ERF::HOXB13 2 datasets
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
Motif ES_0h ES_0h-ERFHOXB13_MA1937.2 13 bp overlap
ERF::NHLH1 2 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 237 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 215 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 227 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 245 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 205 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 215 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 230 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 192 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 215 bp overlap
ETV2::DRGX 2 datasets
Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap
Motif ES_0h ES_0h-ETV2DRGX_MA1940.2 12 bp overlap
ETV5::DRGX 5 datasets
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_24h DE_24h-ETV5DRGX_MA1944.2 12 bp overlap
Motif ES_0h ES_0h-ETV5DRGX_MA1944.2 12 bp overlap
Motif ES_0h ES_0h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::HOXA2 2 datasets
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif ES_0h ES_0h-ETV5HOXA2_MA1948.2 12 bp overlap
EZH2 1 dataset
ChIP T98G GSE112240.EZH2.T98G 207 bp overlap
Ebf2 2 datasets
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
Erg 3 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif ES_0h ES_0h-FLI1DRGX_MA1949.2 14 bp overlap
FOS 2 datasets
ChIP MCF-7 ENCFF282FWZ 249 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 197 bp overlap
GABPA 4 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
ChIP MCF-7 ENCSR000BUK.GABPA.MCF-7 192 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 118 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif ES_0h ES_0h-HOXB2ELK1_MA1957.1 14 bp overlap
IKZF2 3 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 95 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
PPARA::RXRA 1 dataset
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
RAD21 9 datasets
ChIP H1 ENCFF698EWO 118 bp overlap
ChIP H1 ENCFF967OJF 232 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 154 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 172 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 239 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 196 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 147 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMARCA4 1 dataset
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 257 bp overlap
SPDEF 2 datasets
Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap
Motif ES_0h ES_0h-SPDEF_MA0686.2 10 bp overlap
STAG1 1 dataset
ChIP MCF-7 ERP000209.STAG1.MCF-7 163 bp overlap
TBX19 1 dataset
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 122 bp overlap
Tcf21 2 datasets
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
YY1 2 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 124 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 145 bp overlap
ZBTB26 3 datasets
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
Motif ES_0h ES_0h-ZBTB26_MA1579.2 8 bp overlap
ZBTB7A 2 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
Motif ES_0h ES_0h-ZBTB7A_MA0750.3 9 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 153 bp overlap
ZNF184 3 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_24h DE_24h-ZNF184_MA2120.1 13 bp overlap
Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF26 1 dataset
ChIP HEK293T GSE78099.ZNF26.HEK293T 211 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif ES_0h ES_0h-ZNF341_MA1655.2 8 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF549 5 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_24h DE_24h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF610 2 datasets
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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