chr2 : 96,410,957 96,411,455
498 bp 56 TFs 0 linked genes
This 498 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:96,405,957 – 96,416,455
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE110655.AR.LNCaP 167 bp overlap
ARID2 1 dataset
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 312 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 498 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 289 bp overlap
BRD4 3 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 230 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 137 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 244 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 359 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 481 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 50 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 413 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 221 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 414 bp overlap
FOSL2 1 dataset
ChIP A-549 ENCSR000BQO.FOSL2.A-549 174 bp overlap
FOXA1 16 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 160 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 475 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 426 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 455 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 284 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 368 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 407 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 421 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 498 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 234 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 317 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 379 bp overlap
ChIP liver ERP002306.FOXA1.liver 134 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 498 bp overlap
ChIP prostate_P29 GSE130408.FOXA1.prostate_P29 200 bp overlap
FOXA2 11 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 437 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 470 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 391 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 189 bp overlap
ChIP DE DE-FOXA2-1 468 bp overlap
ChIP DE DE-FOXA2-2 498 bp overlap
ChIP HepG2 ENCFF533COJ 267 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 410 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 469 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 497 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 497 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 223 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 223 bp overlap
GATA3 1 dataset
ChIP A-549 ENCSR000BTI.GATA3.A-549 147 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 498 bp overlap
ChIP DE DE-GATA4-2 498 bp overlap
ChIP foregut GSE117136.GATA4.foregut 381 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 498 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 498 bp overlap
GATA6 10 datasets
ChIP AGS GSE51705.GATA6.AGS 192 bp overlap
ChIP DE DE-GATA6-1 498 bp overlap
ChIP DE DE-GATA6-2 498 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 322 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 169 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap
ChIP foregut GSE117136.GATA6.foregut 410 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 314 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 283 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 498 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 314 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 486 bp overlap
HNF1A 1 dataset
ChIP NY15 GSE108150.HNF1A.NY15 498 bp overlap
HNF1B 2 datasets
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 498 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 488 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 137 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 155 bp overlap
HOXB13 17 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 57 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 64 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 194 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 183 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 216 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 201 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 247 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 201 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 214 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 310 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 188 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 158 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 197 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 212 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 259 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 408 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 145 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 276 bp overlap
ChIP PANC-1 GSE119930.HOXB8.PANC-1 354 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 392 bp overlap
JUN 1 dataset
ChIP Calu-3 GSE85401.JUN.Calu-3 141 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 474 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 498 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 350 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 395 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 423 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 350 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 216 bp overlap
ChIP HepG2 ENCFF243FIR 341 bp overlap
ChIP liver ERP002306.ONECUT1.liver 143 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 498 bp overlap
ONECUT2 2 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 309 bp overlap
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 307 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 355 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 417 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 205 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 229 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 236 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 122 bp overlap
RXR 3 datasets
ChIP LS180 GSE31939.RXR.LS180 145 bp overlap
ChIP LS180_125 GSE31939.RXR.LS180_125 236 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 446 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 498 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 459 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 397 bp overlap
SMAD3 3 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 483 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 498 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 272 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 206 bp overlap
SOX9 1 dataset
ChIP HT29 GSE63629.SOX9.HT29 212 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 196 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 322 bp overlap
VDR 8 datasets
ChIP LNCaP GSE64656.VDR.LNCaP 365 bp overlap
ChIP LS180_125 GSE31939.VDR.LS180_125 432 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 130 bp overlap
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 232 bp overlap
ChIP THP-1_2h_1-25-OH-2D3 GSE89431.VDR.THP-1_2h_1-25-OH-2D3 131 bp overlap
ChIP THP-1_EtOH_1d GSE89431.VDR.THP-1_EtOH_1d 139 bp overlap
ChIP primary-prostate-epithelial-cell GSE124576.VDR.primary-prostate-epithelial-cell 77 bp overlap
ChIP primary-prostate-epithelial-cell_ethanol GSE124576.VDR.primary-prostate-epithelial-cell_ethanol 129 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 171 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 157 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 125 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 210 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 170 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 285 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 75 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 98 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 217 bp overlap