chr2 : 77,387,357 – 77,387,762

405 bp 62 TFs 0 linked genes

This 405 bp open chromatin element has no linked target genes and is bound by 62 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

62 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 217 bp overlap

ARNT::HIF1A 1 dataset

Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 194 bp overlap

Arnt 1 dataset

Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap

Arntl 1 dataset

Motif ES_0h ES_0h-Arntl_MA0603.2 8 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 163 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 235 bp overlap

CTCF 7 datasets

ChIP GM23338 ENCFF772DML 184 bp overlap

ChIP GSC23 GSE139416.CTCF.GSC23 300 bp overlap

ChIP H1 ENCFF764RHO 216 bp overlap

ChIP H9 ENCFF152GTF 294 bp overlap

ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 159 bp overlap

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 160 bp overlap

ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 148 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 262 bp overlap

ERG 1 dataset

ChIP VCaP GSE49091.ERG.VCaP 131 bp overlap

ESR1 1 dataset

ChIP MCF-7_MRNAHIST ERP002305.ESR1.MCF-7_MRNAHIST 158 bp overlap

FEZF2 1 dataset

Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 325 bp overlap

HOXC13 1 dataset

Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap

MAFK 1 dataset

ChIP WA01 ENCSR000EBS.MAFK.WA01 187 bp overlap

MAX 2 datasets

Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 205 bp overlap

MEIS1 1 dataset

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MLXIPL 1 dataset

Motif ES_0h ES_0h-MLXIPL_MA0664.2 8 bp overlap

MNT 1 dataset

Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap

MYB 1 dataset

Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap

MYC 2 datasets

Motif ES_0h ES_0h-MYC_MA0147.4 8 bp overlap

ChIP WA01 ENCSR000EBY.MYC.WA01 142 bp overlap

Mlxip 1 dataset

Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 399 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 271 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 264 bp overlap

ChIP hESC GSE20650.NANOG.hESC 169 bp overlap

NFAT5 1 dataset

ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 125 bp overlap

NFIA 1 dataset

Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap

NKX2-2 1 dataset

Motif ES_0h ES_0h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif ES_0h ES_0h-NKX2-5_MA0063.3 7 bp overlap

Nr5A2 1 dataset

Motif ES_0h ES_0h-Nr5A2_MA0505.3 9 bp overlap

POU2F1 1 dataset

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 2 datasets

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 146 bp overlap

POU2F3 1 dataset

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F4 1 dataset

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU5F1 9 datasets

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 405 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 405 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 115 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 313 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 327 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 288 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 181 bp overlap

POU5F1B 1 dataset

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

Pparg::Rxra 1 dataset

Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap

RAD21 1 dataset

ChIP H1 ENCFF698EWO 190 bp overlap

RFX2 1 dataset

Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap

RFX3 1 dataset

Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap

RFX5 1 dataset

Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 209 bp overlap

SMARCA4 3 datasets

ChIP NSC GSE125033.SMARCA4.NSC 399 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 405 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 399 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 312 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 223 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 359 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 333 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 275 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 278 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 204 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 396 bp overlap

ZFP42 1 dataset

Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 269 bp overlap

ZNF547 1 dataset

Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap

ZNF549 1 dataset

Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap

ZNF75D 1 dataset

Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap

ZNF766 1 dataset

Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap

ZNF8 1 dataset

Motif ES_0h ES_0h-ZNF8_MA1718.1 20 bp overlap

Zfp335 1 dataset

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap