chr2 : 50,615,433 – 50,615,812

379 bp 69 TFs 1 linked gene

This 379 bp open chromatin element is linked to ENSG00000283058 and is bound by 69 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000283058		5.1 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

69 transcription factors

ATF2 1 dataset

Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 108 bp overlap

BCOR 1 dataset

ChIP WA01 GSE104690.BCOR.WA01 110 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 2 datasets

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF2 1 dataset

Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap

ELF3 2 datasets

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

ELF4 1 dataset

Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap

ELK4 1 dataset

Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap

ERG 1 dataset

ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 114 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

Erg 2 datasets

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FOS::JUN 1 dataset

Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap

GABPA 2 datasets

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GATA1::TAL1 1 dataset

Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

GRHL1 1 dataset

Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap

GRHL2 1 dataset

Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000BNR.HDAC2.WA01 116 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HOXA6 1 dataset

Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

HOXB6 1 dataset

Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap

HOXD8 1 dataset

Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap

Hmga1 1 dataset

Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 2 datasets

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

JUN 3 datasets

Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 186 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 181 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LEF1 1 dataset

ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 99 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 10 datasets

ChIP GM23338 ENCFF065NZG 202 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 149 bp overlap

ChIP H1 ENCFF747ZPQ 222 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 363 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 198 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 145 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 284 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 280 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 261 bp overlap

ChIP hESC GSE18292.NANOG.hESC 166 bp overlap

NFIL3 1 dataset

Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 153 bp overlap

NR2F1 1 dataset

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 220 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU4F2 1 dataset

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

POU4F3 1 dataset

Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap

POU5F1 12 datasets

ChIP GM23338 ENCFF333SNB 216 bp overlap

ChIP H1 ENCFF698ZAP 173 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 331 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 326 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 379 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 147 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 209 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 175 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 140 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 325 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 194 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 113 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RARB 1 dataset

Motif DE_12h DE_12h-RARB_MA1552.2 13 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

RXRB 1 dataset

Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap

RXRG 1 dataset

Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap

SMARCA4 3 datasets

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 252 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 125 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 283 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 284 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 83 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 195 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 93 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 243 bp overlap

SPI1 1 dataset

ChIP EM-3 GSE128834.SPI1.EM-3 57 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

ZBTB7A 1 dataset

Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap

ZNF214 1 dataset

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

ZNF354A 1 dataset

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap