chr2 : 46,551,009 46,551,446
437 bp 51 TFs 2 linked genes
This 437 bp open chromatin element is linked to RHOQ and ATP6V1E2 and is bound by 51 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RHOQ 8.3 kb Proximal Proximity
ATP6V1E2 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:46,546,009 – 46,556,446
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 155 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 411 bp overlap
ChIP K562 ENCFF938UXQ 423 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 97 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 280 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 339 bp overlap
ChIP K562 ENCFF673OEZ 184 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 189 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 143 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 408 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 344 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 221 bp overlap
ERG 1 dataset
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 187 bp overlap
ESR1 8 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 175 bp overlap
ChIP MCF-7_IL1b-ICI GSE67295.ESR1.MCF-7_IL1b-ICI 198 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 331 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 302 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 175 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 293 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 276 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 263 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 76 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 306 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 138 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 327 bp overlap
GATA1 6 datasets
ChIP K-562 GSE107726.GATA1.K-562 260 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 123 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 73 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 214 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 281 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
GATA2 10 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 336 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 173 bp overlap
ChIP K562 ENCFF830LLA 437 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 374 bp overlap
ChIP SK-N-SH ENCFF764OZD 184 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 189 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 250 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 150 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 150 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 292 bp overlap
GATA3 4 datasets
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 277 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 263 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 231 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 139 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 187 bp overlap
ChIP DE DE-GATA4-1 437 bp overlap
ChIP DE DE-GATA4-2 437 bp overlap
ChIP foregut GSE117136.GATA4.foregut 318 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 437 bp overlap
ChIP DE DE-GATA6-2 423 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 412 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 406 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 242 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 437 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 437 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 403 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 437 bp overlap
ChIP foregut GSE117136.GATA6.foregut 355 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 272 bp overlap
GRHL2 1 dataset
ChIP MCF-7 GSE109820.GRHL2.MCF-7 181 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 256 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 108 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 431 bp overlap
ChIP K562 ENCFF348IBL 437 bp overlap
ChIP K562 ENCFF348IBL 298 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 185 bp overlap
MED1 1 dataset
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 82 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 154 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 126 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 226 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 310 bp overlap
POLR2A 1 dataset
ChIP GM12878 ENCFF521FXC 434 bp overlap
RELA 1 dataset
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 186 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 285 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 318 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 165 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 232 bp overlap
STAT1_pS727 2 datasets
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 264 bp overlap
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 69 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 185 bp overlap
TAL1 4 datasets
ChIP K-562 GSE107726.TAL1.K-562 406 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 248 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 240 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 179 bp overlap
TBX5 4 datasets
ChIP G296S GSE85628.TBX5.G296S 217 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 217 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 106 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 118 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 216 bp overlap
ChIP K562 ENCFF319QZT 338 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 131 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 230 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 390 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 201 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 235 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 91 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 137 bp overlap
ZKSCAN5 1 dataset
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 239 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 227 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 253 bp overlap