chr19 : 56,153,585 56,153,847
262 bp 39 TFs 0 linked genes
This 262 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:56,148,585 – 56,158,847
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 262 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 262 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 197 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 221 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 194 bp overlap
CTCF 1 dataset
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 197 bp overlap
ERG 1 dataset
ChIP SEM GSE117864.ERG.SEM 199 bp overlap
ESR1 4 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 210 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 188 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 158 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 205 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 262 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF449HPV 67 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 178 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 171 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 177 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 206 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 262 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 167 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 262 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 191 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 207 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF565JGD 198 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 82 bp overlap
POLR2A 2 datasets
ChIP body of pancreas ENCFF675RCN 262 bp overlap
ChIP body of pancreas ENCFF727UBE 262 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP liver ENCFF522JHE 143 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 180 bp overlap
RELA 4 datasets
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 176 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 262 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 153 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 262 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 171 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 240 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 262 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 254 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 112 bp overlap
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 168 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 229 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 189 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 78 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 177 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 262 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 158 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 262 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 262 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 237 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 262 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 207 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 225 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 262 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 262 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 255 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 110 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 213 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 260 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 237 bp overlap
ChIP liver ENCFF769YSM 231 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 212 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 262 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 156 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 262 bp overlap
ChIP hESC GSE122298.TBP.hESC 179 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 116 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 171 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 132 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 262 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 262 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 54 bp overlap