chr18 : 66,676,781 66,677,191
410 bp 64 TFs 0 linked genes
This 410 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:66,671,781 – 66,682,191
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
ASCL1 4 datasets
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 119 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 144 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 128 bp overlap
Arid3a 2 datasets
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
BCL11A 4 datasets
ChIP H1 ENCFF833IPY 142 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 291 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 151 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 410 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 206 bp overlap
CTCF 1 dataset
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 108 bp overlap
CUX1 2 datasets
Motif DE_12h DE_12h-CUX1_MA0754.3 9 bp overlap
Motif DE_60h DE_60h-CUX1_MA0754.3 9 bp overlap
CUX2 2 datasets
Motif DE_12h DE_12h-CUX2_MA0755.2 9 bp overlap
Motif DE_60h DE_60h-CUX2_MA0755.2 9 bp overlap
DPRX 1 dataset
Motif DE_12h DE_12h-DPRX_MA1480.2 9 bp overlap
DUXA 2 datasets
Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Dux 2 datasets
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EP300 4 datasets
ChIP H1 ENCFF927IYK 190 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 186 bp overlap
ChIP hESC GSE17917.EP300.hESC 254 bp overlap
ChIP tibial nerve ENCFF346AYA 320 bp overlap
ESR1 2 datasets
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 229 bp overlap
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 182 bp overlap
FIGLA 4 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 379 bp overlap
ChIP DE DE-FOXA2-2 410 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 293 bp overlap
GATA1 1 dataset
Motif DE_12h DE_12h-GATA1_MA0035.5 7 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 327 bp overlap
ChIP DE DE-GATA4-2 379 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 281 bp overlap
ChIP DE DE-GATA6-2 338 bp overlap
GRHL2 2 datasets
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 179 bp overlap
LHX6 2 datasets
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
MAF::NFE2 2 datasets
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 2 datasets
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_60h DE_60h-MAFGNFE2L1_MA0089.3 11 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 217 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 247 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 235 bp overlap
ChIP H1 ENCFF747ZPQ 191 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 377 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 310 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 277 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 386 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 341 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 178 bp overlap
ChIP hESC GSE18292.NANOG.hESC 215 bp overlap
ChIP hESC GSE20650.NANOG.hESC 207 bp overlap
ONECUT1 2 datasets
Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap
Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap
OSR1 2 datasets
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
Motif DE_60h DE_60h-OSR1_MA1542.2 8 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 206 bp overlap
PAX3 1 dataset
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
POU5F1 8 datasets
ChIP GM23338 ENCFF333SNB 235 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 385 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 141 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 127 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 126 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 238 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 160 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 210 bp overlap
Pax7 1 dataset
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 283 bp overlap
SATB1 3 datasets
ChIP MCF-10A GSE123292.SATB1.MCF-10A 116 bp overlap
ChIP MCF-10A_CP GSE123292.SATB1.MCF-10A_CP 56 bp overlap
ChIP MCF-10A_N-term_CUT1 GSE123292.SATB1.MCF-10A_N-term_CUT1 65 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 355 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 358 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 217 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 371 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE21614.SMAD3.BG03 220 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 210 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 197 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 203 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 167 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 222 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 267 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 198 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 193 bp overlap
SNAI1 2 datasets
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
Motif DE_60h DE_60h-SNAI1_MA1558.2 7 bp overlap
SNAI3 2 datasets
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 305 bp overlap
SOX2 3 datasets
ChIP H9 GSE46837.SOX2.H9 183 bp overlap
ChIP hESC GSE18292.SOX2.hESC 181 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 268 bp overlap
SOX9 2 datasets
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 189 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 218 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
TCF12 4 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
Motif DE_60h DE_60h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 217 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 212 bp overlap
TCF3 3 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap
ChIP NPC GSE154479.TCF3.NPC 378 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 311 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP WTC11 ENCFF359JCU 381 bp overlap
Tfcp2l1 2 datasets
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Motif DE_60h DE_60h-Tfcp2l1_MA0145.2 14 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 181 bp overlap
ZEB1 4 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF317 2 datasets
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap