chr17 : 52,136,298 – 52,136,564

266 bp 55 TFs 0 linked genes

This 266 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

55 transcription factors

AR 2 datasets

ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 136 bp overlap

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 171 bp overlap

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 182 bp overlap

Arid3a 2 datasets

Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap

Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap

BRD4 2 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 216 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 157 bp overlap

CEBPA 1 dataset

ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 91 bp overlap

CEBPB 1 dataset

ChIP HepG2 ENCFF536NTI 97 bp overlap

Cebpa 5 datasets

ChIP BLaER1 ENCFF093OYK 163 bp overlap

ChIP BLaER1 ENCFF335XTP 210 bp overlap

ChIP BLaER1 ENCFF364PUR 205 bp overlap

ChIP BLaER1 ENCFF460KDD 198 bp overlap

ChIP BLaER1 ENCFF896HSY 208 bp overlap

DMRTA2 1 dataset

Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap

DUXA 2 datasets

Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap

Motif ES_0h ES_0h-DUXA_MA0884.2 13 bp overlap

Dux 2 datasets

Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap

Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap

ESR1 1 dataset

ChIP ZR751 ERP000783.ESR1.ZR751 207 bp overlap

ESRRA 1 dataset

ChIP BT-474 GSE81651.ESRRA.BT-474 266 bp overlap

FOSL2 1 dataset

ChIP hESC GSE69539.FOSL2.hESC 147 bp overlap

FOXA1 6 datasets

ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 266 bp overlap

ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 261 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 266 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 254 bp overlap

ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 266 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 228 bp overlap

GATA2 1 dataset

ChIP ESF GSE108408.GATA2.ESF 166 bp overlap

HAND2 1 dataset

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 266 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 166 bp overlap

HOXB4 2 datasets

Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap

Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap

HOXB9 2 datasets

Motif DE_12h DE_12h-HOXB9_MA1503.2 9 bp overlap

Motif ES_0h ES_0h-HOXB9_MA1503.2 9 bp overlap

HOXC10 2 datasets

Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap

Motif ES_0h ES_0h-HOXC10_MA0905.2 9 bp overlap

HOXC13 2 datasets

Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap

Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap

HOXC4 2 datasets

Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap

Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap

HOXD12 2 datasets

Motif DE_12h DE_12h-HOXD12_MA0873.2 10 bp overlap

Motif ES_0h ES_0h-HOXD12_MA0873.2 10 bp overlap

HOXD4 2 datasets

Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap

Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap

Hoxa11 2 datasets

Motif DE_12h DE_12h-Hoxa11_MA0911.2 9 bp overlap

Motif ES_0h ES_0h-Hoxa11_MA0911.2 9 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 95 bp overlap

MYCN 2 datasets

ChIP Kelly GSE94822.MYCN.Kelly 98 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 213 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap

NEUROG2 1 dataset

Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap

NKX6-1 2 datasets

Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap

Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap

NKX6-3 2 datasets

Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap

Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap

NR3C1 1 dataset

ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 136 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 173 bp overlap

POU5F1 2 datasets

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 234 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 211 bp overlap

POU6F1 2 datasets

Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap

Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap

POU6F2 2 datasets

Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap

Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap

RARA 1 dataset

ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 203 bp overlap

SIX2 1 dataset

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 140 bp overlap

SMARCA4 1 dataset

ChIP NGP GSE134626.SMARCA4.NGP 143 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 188 bp overlap

SOX8 1 dataset

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 175 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SS18 1 dataset

ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 266 bp overlap

STAT3 1 dataset

ChIP BT-474 GSE152203.STAT3.BT-474 250 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 153 bp overlap

TCF7L2 1 dataset

ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 266 bp overlap

TFAP2A 2 datasets

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

ChIP WA09 GSE105081.TFAP2A.WA09 115 bp overlap

TFAP2B 1 dataset

Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap

TFAP2C 1 dataset

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

TFAP2E 1 dataset

Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap

TP53 1 dataset

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 244 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 200 bp overlap

ZNF263 2 datasets

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap