chr1 : 237,044,300 237,044,664
364 bp 44 TFs 1 linked gene
This 364 bp open chromatin element is linked to RYR2 and is bound by 44 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RYR2 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:237,039,300 – 237,049,664
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 237 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 364 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 364 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 242 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 364 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 228 bp overlap
CBX4 1 dataset
ChIP HEK293T GSE53495.CBX4.HEK293T 90 bp overlap
CTCF 1 dataset
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 346 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 152 bp overlap
ESRRA 3 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 298 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 302 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 364 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 180 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 331 bp overlap
EZH2 6 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 232 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 158 bp overlap
ChIP T98G GSE112240.EZH2.T98G 209 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 276 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 129 bp overlap
ChIP neural progenitor cell ENCFF472NFV 66 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-2 320 bp overlap
ChIP G296S GSE85628.GATA4.G296S 364 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 364 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 364 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 314 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 356 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 356 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 364 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 364 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-2 314 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 273 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 364 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 364 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 364 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 364 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 184 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 266 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 227 bp overlap
HIF1A 1 dataset
ChIP macrophage_HYPO GSE43109.HIF1A.macrophage_HYPO 78 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 307 bp overlap
HNRNPK 4 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 83 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 83 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 51 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 51 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 171 bp overlap
MAX 3 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 202 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 223 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 190 bp overlap
MED1 2 datasets
ChIP cardiomyocyte GSE85628.MED1.cardiomyocyte 333 bp overlap
ChIP cardiomyocyte_1 GSE85628.MED1.cardiomyocyte_1 334 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 318 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 101 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 364 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 334 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 92 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 364 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 320 bp overlap
POLR2A 1 dataset
ChIP heart left ventricle ENCFF591JWH 284 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 247 bp overlap
RNF2 2 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 266 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 364 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 161 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 194 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 177 bp overlap
SUZ12 3 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 343 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 364 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 291 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 364 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 347 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 172 bp overlap
ZIC2 2 datasets
ChIP HEK293 ENCFF033NQQ 347 bp overlap
ChIP HEK293 ENCFF033NQQ 283 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 364 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 224 bp overlap