chr1 : 220,371,048 – 220,371,771
723 bp 50 TFs 0 linked genes
This 723 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:220,366,048 – 220,376,771
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
Bcl11B 3 datasets
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
Motif ES_0h ES_0h-Bcl11B_MA1989.2 9 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
CTCF 283 datasets
ChIP 22Rv1 ENCFF466OXN 521 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 363 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 336 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 109 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 352 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 257 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 300 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 164 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 224 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP C4-2B ENCFF821XVN 632 bp overlap
ChIP Caco-2 ENCFF753NZV 444 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 150 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
ChIP DND-41 ENCFF913MRA 317 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 182 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 319 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 350 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 195 bp overlap
ChIP GM06990 ENCFF471OQT 297 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 181 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 131 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 163 bp overlap
ChIP GM12864 ENCFF357DQE 285 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 160 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 105 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 112 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 127 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 131 bp overlap
ChIP GM12872 ENCFF697BYI 285 bp overlap
ChIP GM23338 ENCFF531QOI 245 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 484 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 263 bp overlap
ChIP H1 ENCFF230QSV 52 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 200 bp overlap
ChIP H9 ENCFF152GTF 352 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 287 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 184 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 295 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 206 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 207 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 254 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 222 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 246 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 217 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 673 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 446 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 214 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 159 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 414 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 267 bp overlap
ChIP HCT116 ENCFF003KHP 412 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HCT116 ENCFF373YMA 356 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 200 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 143 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 98 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 271 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCFF821TIC 418 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 178 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 218 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 155 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 124 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 298 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 348 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 334 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 334 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 236 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 235 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 228 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 401 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 251 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 417 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 217 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 135 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 214 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 319 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 316 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 178 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 169 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 175 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 155 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 195 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 129 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 145 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 101 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 351 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 351 bp overlap
ChIP Jurkat GSE130140.CTCF.Jurkat 140 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 256 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 193 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 160 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 134 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 144 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 143 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 124 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 133 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 116 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 116 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 191 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 96 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 103 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 99 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 396 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 230 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 203 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 171 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP K562 ENCFF400DFR 241 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 329 bp overlap
ChIP KB_5Z GSE134435.CTCF.KB_5Z 138 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 141 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 242 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 201 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 188 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 221 bp overlap
ChIP LNCAP ENCFF700QXT 517 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 272 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 132 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 222 bp overlap
ChIP Loucy ENCFF359TVQ 132 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 432 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 209 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 309 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 259 bp overlap
ChIP MCF-7 ENCFF139NQI 277 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 123 bp overlap
ChIP MCF-7 ENCFF210JUZ 403 bp overlap
ChIP MCF-7 ENCFF414SZG 126 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 122 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 518 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 328 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 246 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 213 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 226 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 160 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 199 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 129 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 351 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 369 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 307 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 315 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 259 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 191 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 181 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 117 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 318 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 276 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 293 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 213 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 266 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 336 bp overlap
ChIP OCI-LY1 ENCFF455ESK 451 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 168 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 569 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 394 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 240 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 278 bp overlap
ChIP PC-3 ENCFF487TUI 139 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 480 bp overlap
ChIP PC-9 ENCFF539ULB 479 bp overlap
ChIP Peyer's patch ENCFF701KWW 351 bp overlap
ChIP Peyer's patch ENCFF746TCR 182 bp overlap
ChIP Peyer's patch ENCFF828IDE 341 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 352 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 234 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 238 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 166 bp overlap
ChIP SK-N-SH ENCFF731NJX 251 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 150 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 148 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 100 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 144 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 321 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 260 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 283 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 219 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 211 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 169 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 429 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 149 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 151 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 203 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 213 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 182 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 175 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 316 bp overlap
ChIP WTC11 ENCFF658QVH 456 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 156 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 153 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 111 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 239 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 271 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 365 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 287 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 352 bp overlap
ChIP endodermal cell ENCFF471YCZ 315 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 305 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 357 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 331 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 208 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 227 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 183 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 268 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 313 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 164 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 103 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 363 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 245 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 318 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 385 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 320 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 207 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 273 bp overlap
ChIP hESC GSE20650.CTCF.hESC 112 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 276 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 293 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 459 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 124 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 415 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 260 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 229 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 159 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 266 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 216 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 183 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 211 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 246 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 243 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 157 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 138 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 266 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 249 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 264 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 381 bp overlap
ChIP islet ERP004003.CTCF.islet 330 bp overlap
ChIP keratinocyte ENCFF046PBT 150 bp overlap
ChIP keratinocyte ENCFF291YDC 149 bp overlap
ChIP keratinocyte ENCFF667ULX 325 bp overlap
ChIP keratinocyte ENCFF805QIE 361 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 597 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 368 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 331 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 199 bp overlap
ChIP keratinocyte_mut2 GSE123711.CTCF.keratinocyte_mut2 168 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 257 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 265 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 271 bp overlap
ChIP neural progenitor cell ENCFF420RBO 195 bp overlap
ChIP neural progenitor cell ENCFF581WPG 487 bp overlap
ChIP neural progenitor cell ENCFF581WPG 281 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 295 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 197 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 100 bp overlap
ChIP placenta ENCFF029PHY 446 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 312 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 213 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 265 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 509 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 183 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
ChIP transverse colon ENCFF653EYS 346 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 484 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 258 bp overlap
ESR1 11 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 292 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 347 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 286 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 277 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 315 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 273 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 276 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 287 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 315 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 268 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 359 bp overlap
EWSR1-FLI1 3 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
GATA6 3 datasets
ChIP AGS GSE51936.GATA6.AGS 133 bp overlap
ChIP DE DE-GATA6-2 118 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 275 bp overlap
HSF1 2 datasets
Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap
ChIP HCT-116_A8_43 GSE152144.HSF1.HCT-116_A8_43 189 bp overlap
HSF2 1 dataset
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 146 bp overlap
KLF11 2 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
MED1 2 datasets
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 225 bp overlap
ChIP LS180 GSE39277.MED1.LS180 124 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 400 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 192 bp overlap
RAD21 54 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 162 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 451 bp overlap
ChIP H1 ENCFF698EWO 211 bp overlap
ChIP H1 ENCFF967OJF 184 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 310 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 218 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 204 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 417 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 290 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 272 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 281 bp overlap
ChIP HCT116 ENCFF568PEO 83 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 256 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 168 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 469 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 623 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 612 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 162 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 171 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP HepG2 ENCFF963UBJ 257 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 156 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 169 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 140 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP MCF-7 ENCFF694KOM 337 bp overlap
ChIP MCF-7 ENCFF694KOM 143 bp overlap
ChIP MCF-7 ENCFF724VCQ 257 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 278 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 228 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 223 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 184 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 219 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 188 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 203 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 140 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 347 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.RAD21.T-47D_NaCl-isotonic-triptolide 280 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 182 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 173 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 332 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 362 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 227 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 287 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 270 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 218 bp overlap
ChIP hiPSC_IID12 GSE106870.RAD21.hiPSC_IID12 127 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 320 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 313 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 355 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 321 bp overlap
RUNX2 3 datasets
Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap
Motif DE_48h DE_48h-RUNX2_MA0511.2 9 bp overlap
Motif ES_0h ES_0h-RUNX2_MA0511.2 9 bp overlap
RUNX3 3 datasets
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap
Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap
Runx1 3 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SCRT1 2 datasets
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 117 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 317 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 148 bp overlap
SMARCB1 1 dataset
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 169 bp overlap
SMC1 4 datasets
ChIP DKO GSE131606.SMC1.DKO 404 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 289 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 223 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 243 bp overlap
SMC1A 7 datasets
ChIP A-549 GSE76893.SMC1A.A-549 212 bp overlap
ChIP HCT-116 GSE112000.SMC1A.HCT-116 255 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 162 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 179 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 165 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 225 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 538 bp overlap
SMC3 9 datasets
ChIP GP5D GSE51234.SMC3.GP5D 422 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 352 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 352 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 352 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 257 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 186 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 163 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 113 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 202 bp overlap
SNAI2 3 datasets
ChIP RD GSE137168.SNAI2.RD 91 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 238 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 189 bp overlap
STAG1 8 datasets
ChIP HeLa GSE126990.STAG1.HeLa 376 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 376 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 219 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 173 bp overlap
ChIP HepG2 ENCFF843EBZ 301 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 258 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 195 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 103 bp overlap
STAG2 3 datasets
ChIP HL-60 GSE131577.STAG2.HL-60 118 bp overlap
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 144 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 287 bp overlap
STAT1 2 datasets
ChIP FaDu_BB608 GSE78212.STAT1.FaDu_BB608 362 bp overlap
ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 193 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR000BJN.TAF1.Hep-G2 128 bp overlap
TCF7L2 3 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 227 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
VENTX 3 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap
Motif ES_0h ES_0h-VENTX_MA0724.1 9 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 70 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 339 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF143 6 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 316 bp overlap
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 143 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 203 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 255 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 147 bp overlap
ZNF574 1 dataset
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 187 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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