chr13 : 84,894,799 84,895,071
272 bp 51 TFs 0 linked genes
This 272 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:84,889,799 – 84,900,071
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 116 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 272 bp overlap
CTCF 108 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 272 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 247 bp overlap
ChIP A673 ENCFF123WOM 272 bp overlap
ChIP C4-2B ENCFF821XVN 272 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 137 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND-41 ENCFF913MRA 272 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 198 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 235 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 181 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12874 ENCFF942MTD 251 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 102 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM23338 ENCFF531QOI 272 bp overlap
ChIP GM23338 ENCFF772DML 155 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 254 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 256 bp overlap
ChIP H9 ENCFF152GTF 163 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 164 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 243 bp overlap
ChIP HCT116 ENCFF209YMI 272 bp overlap
ChIP HFFc6 ENCFF005CJI 237 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 177 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 272 bp overlap
ChIP HeLa-S3 ENCFF626XQK 250 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 132 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 261 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 272 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 265 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 160 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 154 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 140 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 144 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 272 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 244 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 247 bp overlap
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 134 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 157 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP Loucy ENCFF359TVQ 272 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 272 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 228 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 120 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 203 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 272 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 255 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 270 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 269 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 108 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 209 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 253 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 128 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 138 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 193 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 167 bp overlap
ChIP OCI-LY1 ENCFF455ESK 272 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 272 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 198 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 269 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 215 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 265 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 219 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 272 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 204 bp overlap
ChIP RWPE2 ENCFF911IEE 272 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 168 bp overlap
ChIP SK-N-SH ENCFF575DMG 272 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 272 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 115 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 272 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 217 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 262 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 272 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 272 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 272 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 243 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 93 bp overlap
ChIP VCaP ENCFF858YQT 272 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 272 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 117 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 114 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 187 bp overlap
ChIP chondrocyte ENCFF134ORZ 272 bp overlap
ChIP endodermal cell ENCFF471YCZ 272 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 185 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 190 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 179 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 198 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 142 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 161 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 272 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 272 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 128 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 160 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 206 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 210 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 255 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 229 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
ERG 2 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 272 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 258 bp overlap
ESR1 2 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 218 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 162 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 272 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 257 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 199 bp overlap
GATA6 1 dataset
ChIP PATU8988 GSE47535.GATA6.PATU8988 175 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 164 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 229 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 272 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 272 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 272 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 272 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 209 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 272 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 249 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 244 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 235 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 180 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 260 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 272 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 272 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 272 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 228 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 234 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 111 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 272 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 272 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 197 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 272 bp overlap
TBX19 1 dataset
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 198 bp overlap
TP53 1 dataset
ChIP HCT-116_Nutlin3a GSE125927.TP53.HCT-116_Nutlin3a 154 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 272 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 212 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 272 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 272 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap