chr13 : 79,279,488 – 79,280,068

580 bp 54 TFs 0 linked genes

This 580 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

54 transcription factors

BCL6B 2 datasets

Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap

Motif DE_24h DE_24h-BCL6B_MA0731.1 17 bp overlap

CHD2 4 datasets

ChIP H1 ENCFF991MKH 275 bp overlap

ChIP K-562 ENCSR000EHD.CHD2.K-562 140 bp overlap

ChIP K562 ENCFF857WME 283 bp overlap

ChIP WA01 ENCSR000EBT.CHD2.WA01 143 bp overlap

CTCF 2 datasets

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap

DUXA 1 dataset

Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap

Dux 1 dataset

Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 241 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 89 bp overlap

E2F8 2 datasets

Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap

Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap

FOXD2 1 dataset

Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap

FOXG1 1 dataset

Motif DE_24h DE_24h-FOXG1_MA0613.1 8 bp overlap

FOXN3 1 dataset

Motif DE_24h DE_24h-FOXN3_MA1489.1 8 bp overlap

Foxn1 1 dataset

Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 243 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 365 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 336 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 467 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 303 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 317 bp overlap

HOXB13 2 datasets

Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap

Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap

Hmga1 1 dataset

Motif DE_24h DE_24h-Hmga1_MA2124.1 8 bp overlap

Hoxa13 2 datasets

Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap

Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap

INSM1 1 dataset

Motif DE_24h DE_24h-INSM1_MA0155.1 12 bp overlap

ISL2 1 dataset

Motif DE_24h DE_24h-ISL2_MA0914.2 6 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 580 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 253 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 302 bp overlap

KLF13 2 datasets

Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap

Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap

MAZ 1 dataset

Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap

Msgn1 1 dataset

Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap

NFIA 1 dataset

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

Nfat5 2 datasets

Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap

Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 2 datasets

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap

PATZ1 1 dataset

Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap

PHOX2B 1 dataset

Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 487 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 487 bp overlap

PPARG 2 datasets

Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap

Motif DE_24h DE_24h-PPARG_MA0066.2 19 bp overlap

REST 1 dataset

ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 186 bp overlap

RORC 1 dataset

Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 269 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 269 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 458 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 269 bp overlap

Smad4 1 dataset

Motif DE_24h DE_24h-Smad4_MA1153.2 7 bp overlap

TBP 2 datasets

Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap

Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap

VEZF1 2 datasets

Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap

Motif DE_24h DE_24h-VEZF1_MA1578.2 6 bp overlap

Wt1 4 datasets

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap

ZBTB33 2 datasets

Motif DE_24h DE_24h-ZBTB33_MA0527.2 10 bp overlap

ChIP K562 ENCFF911VPU 240 bp overlap

ZIC4 2 datasets

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap

ZNF148 1 dataset

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ZNF157 2 datasets

Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap

Motif DE_24h DE_24h-ZNF157_MA2331.1 21 bp overlap

ZNF189 1 dataset

Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap

ZNF274 1 dataset

Motif DE_24h DE_24h-ZNF274_MA1592.2 12 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF341 1 dataset

Motif DE_24h DE_24h-ZNF341_MA1655.2 8 bp overlap

ZNF530 1 dataset

Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap

ZNF558 1 dataset

Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap

ZNF667 2 datasets

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

Motif DE_24h DE_24h-ZNF667_MA1984.2 11 bp overlap

ZNF677 1 dataset

Motif DE_24h DE_24h-ZNF677_MA2101.1 12 bp overlap

ZNF701 1 dataset

Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

ZNF784 3 datasets

Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap

Motif DE_24h DE_24h-ZNF784_MA1717.2 8 bp overlap