chr13 : 62,337,593 62,337,791
198 bp 48 TFs 0 linked genes
This 198 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:62,332,593 – 62,342,791
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP NGP GSE134626.ARID2.NGP 163 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 197 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 198 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 198 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 158 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 174 bp overlap
BRD4 4 datasets
ChIP BE2C GSE80151.BRD4.BE2C 198 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 198 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 198 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 198 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 198 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 198 bp overlap
CTCF 4 datasets
ChIP BE2C ENCFF757SRF 197 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF772DML 195 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 198 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 198 bp overlap
GATA3 4 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 55 bp overlap
ChIP SH-SY5Y ENCFF475HYF 198 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 87 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 101 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
GTF3C5 1 dataset
ChIP IMR-5_CD532 GSE78957.GTF3C5.IMR-5_CD532 198 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 198 bp overlap
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 198 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 198 bp overlap
MXI1 3 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
ChIP SK-N-SH ENCFF746HVJ 198 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 173 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 198 bp overlap
MYCN 9 datasets
ChIP BE2C GSE80151.MYCN.BE2C 198 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 198 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 106 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 186 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 180 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 198 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 197 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 198 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 138 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 65 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 198 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 168 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 197 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 198 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 145 bp overlap
SMARCA4 4 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 198 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 102 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 198 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 198 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 148 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 57 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 145 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 198 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 187 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 198 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 198 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 188 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap