chr13 : 22,457,659 – 22,458,424
765 bp 71 TFs 0 linked genes
This 765 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:22,452,659 – 22,463,424
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 154 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 214 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 123 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 207 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 187 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 146 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
ASCL1 2 datasets
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
Motif DE_72h DE_72h-ASCL1_MA1100.3 8 bp overlap
Ascl2 2 datasets
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
BACH2 2 datasets
Motif DE_60h DE_60h-BACH2_MA1470.2 19 bp overlap
Motif DE_72h DE_72h-BACH2_MA1470.2 19 bp overlap
BHLHE22 2 datasets
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_72h DE_72h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 2 datasets
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_72h DE_72h-Bhlha15_MA1472.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
E2F6 1 dataset
Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap
E2F8 1 dataset
Motif DE_60h DE_60h-E2F8_MA0865.3 9 bp overlap
ERF::NHLH1 1 dataset
Motif DE_60h DE_60h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 1 dataset
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 250 bp overlap
FOS 1 dataset
Motif DE_60h DE_60h-FOS_MA0476.2 8 bp overlap
FOSL1::JUND 1 dataset
Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 1 dataset
Motif DE_60h DE_60h-FOSL2_MA0478.2 10 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 195 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 765 bp overlap
ChIP DE DE-FOXA2-2 765 bp overlap
GATA2 7 datasets
ChIP ESF GSE108408.GATA2.ESF 227 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 192 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 192 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 237 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 203 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 191 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 311 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 676 bp overlap
ChIP DE DE-GATA4-2 720 bp overlap
ChIP foregut GSE117136.GATA4.foregut 283 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 526 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 528 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 614 bp overlap
ChIP DE DE-GATA6-2 744 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 644 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 536 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 476 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 613 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 498 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 615 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 264 bp overlap
ChIP foregut GSE117136.GATA6.foregut 393 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 394 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 354 bp overlap
GLIS3 1 dataset
Motif DE_60h DE_60h-GLIS3_MA0737.1 14 bp overlap
IKZF2 2 datasets
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 319 bp overlap
Jun 1 dataset
Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 413 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA1639.2 9 bp overlap
MYF5 2 datasets
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
Motif DE_72h DE_72h-MYF5_MA1641.2 8 bp overlap
MYOD1 2 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
MYOG 2 datasets
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
Motif DE_72h DE_72h-MYOG_MA0500.3 8 bp overlap
NHLH1 2 datasets
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
Motif DE_72h DE_72h-NHLH1_MA0048.3 9 bp overlap
NR1H4::RXRA 2 datasets
Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_72h DE_72h-NR1H4RXRA_MA1146.2 13 bp overlap
NR1I3 2 datasets
Motif DE_60h DE_60h-NR1I3_MA1534.2 8 bp overlap
Motif DE_72h DE_72h-NR1I3_MA1534.2 8 bp overlap
NR2F1 2 datasets
Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap
Motif DE_72h DE_72h-NR2F1_MA1538.1 15 bp overlap
NR2F6 2 datasets
Motif DE_60h DE_60h-NR2F6_MA1539.1 15 bp overlap
Motif DE_72h DE_72h-NR2F6_MA1539.1 15 bp overlap
NR4A2::RXRA 2 datasets
Motif DE_60h DE_60h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_72h DE_72h-NR4A2RXRA_MA1147.2 13 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 128 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PBX2 1 dataset
Motif DE_72h DE_72h-PBX2_MA1113.3 9 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
PPARA::RXRA 2 datasets
Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_72h DE_72h-PPARARXRA_MA1148.2 17 bp overlap
PPARG 1 dataset
Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap
Ptf1A 2 datasets
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1619.2 8 bp overlap
RARB 2 datasets
Motif DE_60h DE_60h-RARB_MA1552.2 13 bp overlap
Motif DE_72h DE_72h-RARB_MA1552.2 13 bp overlap
RARG 2 datasets
Motif DE_60h DE_60h-RARG_MA1553.2 13 bp overlap
Motif DE_72h DE_72h-RARG_MA1553.2 13 bp overlap
RORC 2 datasets
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
Motif DE_72h DE_72h-RORC_MA1151.2 10 bp overlap
RUNX3 2 datasets
Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
RXRB 2 datasets
Motif DE_60h DE_60h-RXRB_MA1555.1 14 bp overlap
Motif DE_72h DE_72h-RXRB_MA1555.1 14 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 501 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 372 bp overlap
Stat5a::Stat5b 2 datasets
Motif DE_60h DE_60h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif DE_72h DE_72h-Stat5aStat5b_MA0519.2 9 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap
Tcf12 2 datasets
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Thap11 2 datasets
Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap
Motif DE_72h DE_72h-Thap11_MA1573.2 14 bp overlap
Twist2 2 datasets
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
VEZF1 1 dataset
Motif DE_60h DE_60h-VEZF1_MA1578.2 6 bp overlap
Wt1 2 datasets
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZBTB12 2 datasets
Motif DE_60h DE_60h-ZBTB12_MA1649.2 7 bp overlap
Motif DE_72h DE_72h-ZBTB12_MA1649.2 7 bp overlap
ZIC1 1 dataset
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZNF143 1 dataset
Motif DE_72h DE_72h-ZNF143_MA0088.2 16 bp overlap
ZNF148 2 datasets
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF189 1 dataset
Motif DE_72h DE_72h-ZNF189_MA1725.2 9 bp overlap
ZNF281 2 datasets
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF341 1 dataset
Motif DE_72h DE_72h-ZNF341_MA1655.2 8 bp overlap
ZNF530 2 datasets
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF677 1 dataset
Motif DE_72h DE_72h-ZNF677_MA2101.1 12 bp overlap
ZNF701 1 dataset
Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap
ZNF76 1 dataset
Motif DE_72h DE_72h-ZNF76_MA1716.2 17 bp overlap
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