Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 256 bp overlap

BCOR 4 datasets

ChIP WA01 GSE104690.BCOR.WA01 434 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 162 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 176 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 219 bp overlap

BRD3 1 dataset

ChIP H-1_DE GSE126661.BRD3.H-1_DE 104 bp overlap

BRD4 8 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 448 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 139 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 220 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 241 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 448 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 448 bp overlap

ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 448 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 299 bp overlap

CBX8 2 datasets

ChIP A-549 ENCSR616MOB.CBX8.A-549 151 bp overlap

ChIP A549 ENCFF656LMW 91 bp overlap

CHD7 1 dataset

ChIP H1 ENCFF126NLU 402 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 171 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 165 bp overlap

EP300 1 dataset

ChIP hESC GSE17917.EP300.hESC 159 bp overlap

EZH2 2 datasets

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 253 bp overlap

ChIP neural progenitor cell ENCFF018MKA 377 bp overlap

EZH2_phosphoT487 2 datasets

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 334 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 302 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 379 bp overlap

ChIP DE DE-FOXA2-2 380 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 333 bp overlap

ChIP DE DE-GATA4-2 376 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 332 bp overlap

ChIP DE DE-GATA6-2 389 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 217 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 289 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 342 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 293 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 325 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 258 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 59 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 214 bp overlap

MAX 1 dataset

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 84 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 311 bp overlap

ChIP hESC GSE18292.NANOG.hESC 130 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 448 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 448 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 245 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 212 bp overlap

POLR2A 2 datasets

ChIP GM23338 ENCFF450WCS 341 bp overlap

ChIP H1 ENCFF833NJP 312 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 221 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 448 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 383 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 358 bp overlap

PRDM14 1 dataset

ChIP hESC GSE22767.PRDM14.hESC 416 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 123 bp overlap

RNF2 2 datasets

ChIP WA01 GSE104690.RNF2.WA01 302 bp overlap

ChIP WA09 GSE105028.RNF2.WA09 281 bp overlap

RXRA 2 datasets

ChIP H1 ENCFF570NHK 186 bp overlap

ChIP WA01 ENCSR000BJW.RXRA.WA01 151 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap

SMAD2 2 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 195 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 215 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 294 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 448 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 448 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 448 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 357 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 448 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 379 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 448 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 413 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 270 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 149 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 432 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 424 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 276 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 246 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 305 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 137 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 271 bp overlap

SP1 2 datasets

ChIP H1 ENCFF263FUH 262 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 206 bp overlap

SP4 1 dataset

ChIP WA01 ENCSR000BQV.SP4.WA01 189 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 234 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 226 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 199 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 224 bp overlap

TRIM28 2 datasets

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 66 bp overlap

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 138 bp overlap

Genome Browser