chr12 : 114,746,266 – 114,746,673
407 bp 47 TFs 0 linked genes
This 407 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:114,741,266 – 114,751,673
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 151 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 101 bp overlap
BRD4 8 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 107 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 167 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 157 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 92 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 198 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 104 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 144 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 262 bp overlap
CEBPA 8 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 227 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 85 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 82 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 50 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 120 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 134 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 166 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 76 bp overlap
CEBPB 4 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 106 bp overlap
ChIP IMR-90 ENCFF468UGY 64 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 272 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 312 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 59 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 237 bp overlap
Cebpa 8 datasets
ChIP BLaER1 ENCFF031ISE 241 bp overlap
ChIP BLaER1 ENCFF335XTP 290 bp overlap
ChIP BLaER1 ENCFF346MCV 160 bp overlap
ChIP BLaER1 ENCFF364PUR 274 bp overlap
ChIP BLaER1 ENCFF374ODN 204 bp overlap
ChIP BLaER1 ENCFF419EBE 176 bp overlap
ChIP BLaER1 ENCFF460KDD 220 bp overlap
ChIP BLaER1 ENCFF896HSY 275 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 340 bp overlap
EP300 1 dataset
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 223 bp overlap
EZH2 1 dataset
ChIP PC-9 ENCSR793USK.EZH2.PC-9 244 bp overlap
FOS 1 dataset
ChIP MV4-11 GSE64862.FOS.MV4-11 79 bp overlap
FOXA1 13 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 62 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 73 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 189 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 63 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 108 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 63 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 113 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 132 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 55 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 103 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 128 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 52 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 74 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 224 bp overlap
ChIP DE DE-FOXA2-1 197 bp overlap
ChIP DE DE-FOXA2-2 241 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 150 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 155 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 279 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 195 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 171 bp overlap
GATA2 13 datasets
ChIP ESF GSE108408.GATA2.ESF 274 bp overlap
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 157 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 138 bp overlap
ChIP SH-SY5Y ENCFF485YIB 338 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 301 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 238 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 222 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 322 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 277 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 369 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 237 bp overlap
GATA3 6 datasets
ChIP Jurkat GSE120063.GATA3.Jurkat 222 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 167 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 150 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 155 bp overlap
ChIP SK-N-SH ENCFF040SSB 293 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 249 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 224 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 141 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 239 bp overlap
ChIP DE DE-GATA4-1 349 bp overlap
ChIP DE DE-GATA4-2 407 bp overlap
ChIP foregut GSE117136.GATA4.foregut 379 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 141 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 407 bp overlap
ChIP DE DE-GATA6-2 407 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 407 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 407 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 407 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 407 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 251 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 407 bp overlap
ChIP foregut GSE117136.GATA6.foregut 338 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 382 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 403 bp overlap
ChIP K562 ENCFF348IBL 294 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 229 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 263 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 327 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 312 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 318 bp overlap
KDM1A 3 datasets
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 216 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 217 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 208 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 226 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 300 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 165 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 192 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 192 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 357 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 304 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 392 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 135 bp overlap
RELA 1 dataset
ChIP HeLa-B2_GRKD_DMSO GSE24518.RELA.HeLa-B2_GRKD_DMSO 102 bp overlap
REST 2 datasets
ChIP PFSK-1 ENCFF845VHA 281 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 284 bp overlap
RUNX1 2 datasets
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 163 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 185 bp overlap
SIN3A 1 dataset
ChIP PFSK-1 ENCFF218MAY 215 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 379 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 378 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 344 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 352 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 341 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 123 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 210 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 371 bp overlap
SPI1 6 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 111 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 60 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 94 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 188 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 97 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 185 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 318 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 173 bp overlap
YBX1 1 dataset
ChIP HEL GSE146717.YBX1.HEL 220 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 147 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 169 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 219 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 147 bp overlap
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