chr12 : 109,377,336 109,377,579
243 bp 43 TFs 0 linked genes
This 243 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:109,372,336 – 109,382,579
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
Alx4 1 dataset
Motif ES_0h ES_0h-Alx4_MA0853.2 12 bp overlap
Arid3b 1 dataset
Motif ES_0h ES_0h-Arid3b_MA0601.2 7 bp overlap
Arx 1 dataset
Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 211 bp overlap
ChIP BLaER1 ENCFF262VBH 243 bp overlap
ChIP BLaER1 ENCFF335XTP 179 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif ES_0h ES_0h-DUXA_MA0884.2 13 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 59 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 223 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 144 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
Lhx3 1 dataset
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
MAX 5 datasets
ChIP H1 ENCFF601FOM 141 bp overlap
ChIP H1 ENCFF914VQY 97 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 161 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 243 bp overlap
ChIP WTC11 ENCFF223QFY 243 bp overlap
MEIS2 1 dataset
Motif ES_0h ES_0h-MEIS2_MA1640.2 9 bp overlap
MITF 1 dataset
ChIP 501-mel GSE61965.MITF.501-mel 243 bp overlap
MNT 2 datasets
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF701PYP 87 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 107 bp overlap
MYCN 3 datasets
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 197 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 74 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 74 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 243 bp overlap
PBX2 1 dataset
Motif ES_0h ES_0h-PBX2_MA1113.3 9 bp overlap
PHOX2B 1 dataset
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 243 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 138 bp overlap
POU4F1 1 dataset
Motif ES_0h ES_0h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 227 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 130 bp overlap
Pax7 1 dataset
Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 87 bp overlap
SIX4 2 datasets
ChIP WTC11 ENCFF891HYW 138 bp overlap
ChIP WTC11 ENCFF891HYW 243 bp overlap
SIX5 1 dataset
ChIP H1 ENCFF942SOJ 167 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 196 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 112 bp overlap
SREBF1 1 dataset
ChIP MCF-7 ENCFF254QOR 243 bp overlap
STAT3 1 dataset
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
THAP1 1 dataset
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 213 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 116 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 189 bp overlap
USF2 3 datasets
ChIP H1 ENCFF434EDF 171 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 98 bp overlap
ChIP WTC11 ENCFF139JAW 234 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 154 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF214 1 dataset
Motif ES_0h ES_0h-ZNF214_MA1975.2 13 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF320 1 dataset
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF528 1 dataset
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap