chr12 : 64,229,328 64,229,649
321 bp 44 TFs 2 linked genes
This 321 bp open chromatin element is linked to ENSG00000293269 and KICS2 and is bound by 44 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000293269 7.0 kb Proximal Proximity
KICS2 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:64,224,328 – 64,234,649
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 252 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 239 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 138 bp overlap
CDK6 2 datasets
ChIP KB GSE52469.CDK6.KB 110 bp overlap
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 103 bp overlap
CTCF 4 datasets
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 279 bp overlap
ChIP MCF-7 ENCFF139NQI 216 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 136 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 121 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 169 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 291 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 152 bp overlap
ESR1 3 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 207 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 139 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 221 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 153 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 172 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 321 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 256 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 321 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 321 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 268 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 309 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 142 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 321 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 181 bp overlap
NANOG 4 datasets
ChIP H1 ENCFF747ZPQ 227 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 260 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 228 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 321 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 129 bp overlap
NKX2-2 1 dataset
Motif DE_36h DE_36h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 1 dataset
Motif DE_36h DE_36h-NKX2-5_MA0063.3 7 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 321 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 206 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 146 bp overlap
Plagl1 1 dataset
Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 288 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 321 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 311 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 288 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 281 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 320 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 236 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 156 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 263 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 255 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 180 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 267 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 316 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 201 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 287 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 223 bp overlap
Tfcp2l1 1 dataset
Motif DE_36h DE_36h-Tfcp2l1_MA0145.2 14 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 280 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 317 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 279 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 257 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 279 bp overlap
ZNF777 1 dataset
ChIP HEK293T GSE78099.ZNF777.HEK293T 161 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap