chr12 : 21,324,670 – 21,324,909
239 bp 77 TFs 1 linked gene
This 239 bp open chromatin element is linked to SLCO1A2 and is bound by 77 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SLCO1A2 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:21,319,670 – 21,329,909
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 239 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 239 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 107 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 239 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 226 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 239 bp overlap
CTCF 3 datasets
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 239 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 239 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 239 bp overlap
EBF1 1 dataset
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
ERF::NHLH1 2 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
ESRRA 2 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap
ESRRB 2 datasets
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif ES_0h ES_0h-ESRRB_MA0141.4 10 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 239 bp overlap
Ebf4 1 dataset
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
Esrrg 2 datasets
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
Motif ES_0h ES_0h-Esrrg_MA0643.2 9 bp overlap
FOXA1 2 datasets
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_Mimo GSE90454.FOXA2.BJ1-hTERT_Mimo 150 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
FOXA3 2 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
Motif ES_0h ES_0h-FOXA3_MA1683.2 7 bp overlap
FOXD1 2 datasets
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
Motif ES_0h ES_0h-FOXD1_MA0031.2 7 bp overlap
FOXF2 2 datasets
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
Motif ES_0h ES_0h-FOXF2_MA0030.2 9 bp overlap
FOXG1 2 datasets
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
Motif ES_0h ES_0h-FOXG1_MA0613.1 8 bp overlap
FOXI1 2 datasets
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
Motif ES_0h ES_0h-FOXI1_MA0042.2 7 bp overlap
FOXK1 2 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
Motif ES_0h ES_0h-FOXK1_MA0852.3 7 bp overlap
FOXK2 2 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
Motif ES_0h ES_0h-FOXK2_MA1103.3 7 bp overlap
FOXL1 2 datasets
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
Motif ES_0h ES_0h-FOXL1_MA0033.2 7 bp overlap
FOXO4 2 datasets
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
Motif ES_0h ES_0h-FOXO4_MA0848.1 7 bp overlap
FOXO6 2 datasets
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap
FOXP1 3 datasets
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
Motif ES_0h ES_0h-FOXP1_MA0481.4 7 bp overlap
ChIP H9 GSE31006.FOXP1.H9 183 bp overlap
FOXP2 2 datasets
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif ES_0h ES_0h-FOXP2_MA0593.2 9 bp overlap
FOXP3 2 datasets
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Motif ES_0h ES_0h-FOXP3_MA0850.1 7 bp overlap
FOXP4 2 datasets
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
Motif ES_0h ES_0h-FOXP4_MA2117.1 7 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxf1 2 datasets
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Motif ES_0h ES_0h-Foxf1_MA1606.2 7 bp overlap
Foxj2 2 datasets
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Motif ES_0h ES_0h-Foxj2_MA0614.1 8 bp overlap
Foxo1 2 datasets
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Motif ES_0h ES_0h-Foxo1_MA0480.3 7 bp overlap
Foxo3 2 datasets
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Motif ES_0h ES_0h-Foxo3_MA0157.4 7 bp overlap
Hnf1A 2 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
MSC 2 datasets
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
Motif ES_0h ES_0h-MSC_MA0665.1 10 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 151 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 239 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 239 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 239 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 239 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 239 bp overlap
ChIP hESC GSE18292.NANOG.hESC 152 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 208 bp overlap
NR5A1 2 datasets
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Motif ES_0h ES_0h-NR5A1_MA1540.3 12 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif ES_0h ES_0h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr5A2 2 datasets
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
Motif ES_0h ES_0h-Nr5A2_MA0505.3 9 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 199 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 9 datasets
ChIP GM23338 ENCFF333SNB 239 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 239 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 239 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 188 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 182 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 239 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 239 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 239 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 239 bp overlap
Pgr 1 dataset
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 180 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 139 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 201 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 228 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
Motif ES_0h ES_0h-Rarg_MA0860.1 17 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 239 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 239 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 239 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 212 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 239 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 239 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 3 datasets
ChIP RENVM GSE49404.SOX2.RENVM 135 bp overlap
ChIP hESC GSE18292.SOX2.hESC 111 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 239 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 239 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 217 bp overlap
Sox11 2 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox17 2 datasets
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox5 2 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 2 datasets
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
Stat2 1 dataset
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 107 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 2 datasets
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 233 bp overlap
TFAP4::ETV1 1 dataset
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 110 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 150 bp overlap
Tcf21 2 datasets
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
YY1 1 dataset
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 128 bp overlap
ZIM3 1 dataset
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF677 2 datasets
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
ZSCAN16 1 dataset
Motif ES_0h ES_0h-ZSCAN16_MA2100.1 18 bp overlap
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