chr11 : 93,113,597 – 93,114,252
655 bp 40 TFs 0 linked genes
This 655 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:93,108,597 – 93,119,252
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 184 bp overlap
ChIP LNCaP GSE80256.AR.LNCaP 316 bp overlap
BRD4 2 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 158 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 68 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 244 bp overlap
ChIP K562 ENCFF673OEZ 351 bp overlap
CTCF 144 datasets
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 300 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 316 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 172 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 260 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 379 bp overlap
ChIP A673 ENCFF123WOM 441 bp overlap
ChIP BE2C ENCFF757SRF 317 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 237 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 243 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 160 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 197 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 212 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 185 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 265 bp overlap
ChIP GM12864 ENCFF357DQE 285 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 144 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 122 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 117 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 116 bp overlap
ChIP GM23338 ENCFF531QOI 156 bp overlap
ChIP GM23338 ENCFF772DML 75 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 135 bp overlap
ChIP H9 ENCFF152GTF 342 bp overlap
ChIP H9 ENCFF152GTF 272 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 307 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 295 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 264 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 270 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 216 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 307 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 396 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 350 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 592 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 487 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 369 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 191 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 389 bp overlap
ChIP HCT116 ENCFF003KHP 421 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 69 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 243 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 216 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 178 bp overlap
ChIP HFF-Myc ENCFF680WYR 377 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 89 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 365 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 256 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 376 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 376 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 296 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 270 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 231 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 317 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 425 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 251 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 364 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 118 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 115 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 189 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 275 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 227 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 146 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 138 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 147 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 150 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 120 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 100 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 82 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP IMR-90 GSE43070.CTCF.IMR-90 119 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 311 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 148 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 356 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 156 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 244 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 171 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 206 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 443 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 133 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 317 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 207 bp overlap
ChIP NB4 ENCFF155DNY 251 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 115 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 131 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 411 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 283 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 308 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 277 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 324 bp overlap
ChIP Panc1 ENCFF056JQX 655 bp overlap
ChIP Panc1 ENCFF056JQX 475 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 306 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 291 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 161 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 220 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 183 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 310 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 125 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 174 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 209 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 139 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 208 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 277 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 167 bp overlap
ChIP endodermal cell ENCFF471YCZ 361 bp overlap
ChIP endodermal cell ENCFF471YCZ 278 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 125 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 331 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 170 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 147 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 134 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 103 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 170 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 590 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 296 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 246 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 457 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 148 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 300 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 279 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 237 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 274 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 241 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 281 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 289 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 229 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 184 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 242 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 137 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 405 bp overlap
ChIP neural progenitor cell ENCFF420RBO 201 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 375 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 149 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 295 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 247 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 252 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 437 bp overlap
CTCFL 2 datasets
Motif DE_48h DE_48h-CTCFL_MA1102.3 8 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 170 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 250 bp overlap
E2F1 1 dataset
ChIP HeLa-S3 ENCFF877AEN 121 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 168 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 366 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 183 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 189 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 422 bp overlap
ChIP DE DE-GATA4-2 616 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 190 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 436 bp overlap
ChIP DE DE-GATA6-2 497 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 417 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 438 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 480 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 277 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 391 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 148 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 179 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 141 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 274 bp overlap
RAD21 11 datasets
ChIP H1 ENCFF698EWO 104 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 233 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 192 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 226 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 226 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 164 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 191 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 164 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 136 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 216 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 149 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 145 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 435 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 316 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 524 bp overlap
SMC3 5 datasets
ChIP HeLa GSE126990.SMC3.HeLa 143 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 143 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 143 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 203 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 156 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 250 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 310 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 244 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 436 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 118 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 337 bp overlap
TAL1 4 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 194 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 185 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 195 bp overlap
ChIP K562 ENCFF661CCK 263 bp overlap
TBP 1 dataset
ChIP ME-1 GSE46044.TBP.ME-1 207 bp overlap
TCF12 1 dataset
ChIP H1 ENCFF203EBH 251 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 276 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 181 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_48h DE_48h-ZNF708_MA1730.2 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif DE_48h DE_48h-Zfx_MA0146.3 10 bp overlap
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