chr1 : 198,232,328 – 198,232,671
343 bp 57 TFs 0 linked genes
This 343 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:198,227,328 – 198,237,671
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 337 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 123 bp overlap
BRD2 1 dataset
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 183 bp overlap
BRD4 1 dataset
ChIP NMC24335 GSE96775.BRD4.NMC24335 152 bp overlap
CEBPB 4 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 154 bp overlap
ChIP HeLa-S3 ENCFF722WEG 219 bp overlap
ChIP Ishikawa ENCFF010USJ 206 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 128 bp overlap
CREBBP 1 dataset
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 262 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 255 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 289 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 163 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 180 bp overlap
ERF::FOXI1 1 dataset
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 119 bp overlap
ESR1 5 datasets
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 311 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 249 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 249 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 328 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 156 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 141 bp overlap
FOS 1 dataset
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 134 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 316 bp overlap
FOXA1 1 dataset
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 304 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 1 dataset
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 110 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 208 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 325 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 338 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 135 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 155 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 181 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 255 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 118 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 343 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 235 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 175 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 205 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 311 bp overlap
ChIP hESC GSE18292.NANOG.hESC 216 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 97 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 172 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 343 bp overlap
Nanog 1 dataset
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 301 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 207 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 172 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 343 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 283 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 254 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 343 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 110 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 237 bp overlap
SCRT2 2 datasets
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
ChIP HEK293 ENCFF711QQB 331 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 189 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 209 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 271 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 138 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 343 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 194 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 343 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 343 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 285 bp overlap
SNAI2 3 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 221 bp overlap
ChIP keratinocyte_LacZ_DIFF GSE55421.SNAI2.keratinocyte_LacZ_DIFF 133 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 181 bp overlap
SOX13 1 dataset
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
SOX2 1 dataset
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
SPI1 5 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 177 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 132 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 165 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 104 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 116 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 127 bp overlap
Sox3 1 dataset
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
TCF12 5 datasets
ChIP H1 ENCFF203EBH 222 bp overlap
ChIP Ishikawa ENCFF467DDW 311 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 149 bp overlap
ChIP SK-N-SH ENCFF147AHB 230 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 206 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 287 bp overlap
TEAD1 3 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 292 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 263 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 275 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 5 datasets
ChIP H1 ENCFF778PAX 209 bp overlap
ChIP Ishikawa ENCFF772OTG 77 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 195 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 122 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 302 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF664 1 dataset
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 343 bp overlap
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