chr11 : 28,473,472 – 28,474,059

587 bp 58 TFs 0 linked genes

This 587 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 338 bp overlap

ASCL1 1 dataset

Motif DE_36h DE_36h-ASCL1_MA1631.2 9 bp overlap

BHLHE23 1 dataset

Motif DE_36h DE_36h-BHLHE23_MA0817.2 10 bp overlap

BRD4 1 dataset

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 194 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 238 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF364PUR 252 bp overlap

ChIP BLaER1 ENCFF680YXW 302 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 286 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 226 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap

FIGLA 1 dataset

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

FOXA1 3 datasets

ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 91 bp overlap

ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 72 bp overlap

ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 88 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 354 bp overlap

ChIP DE DE-FOXA2-2 382 bp overlap

FOXD2 1 dataset

Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 236 bp overlap

GATA2 1 dataset

Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 426 bp overlap

ChIP DE DE-GATA4-2 288 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 445 bp overlap

ChIP DE DE-GATA6-2 398 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 550 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 587 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 587 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 473 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 587 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 587 bp overlap

Gata3 1 dataset

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 110 bp overlap

HMGA2 1 dataset

ChIP WTC11 ENCFF535JLP 58 bp overlap

Hnf1A 1 dataset

Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 267 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 360 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 493 bp overlap

LMO2 1 dataset

ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap

Lef1 1 dataset

Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap

MYCN 1 dataset

ChIP RH4 GSE83726.MYCN.RH4 205 bp overlap

MYOD1 1 dataset

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 348 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 389 bp overlap

POU3F1 1 dataset

Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

PPARA::RXRA 1 dataset

Motif DE_36h DE_36h-PPARARXRA_MA1148.2 17 bp overlap

PRDM1 1 dataset

Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap

RARA 1 dataset

Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap

RARA::RXRA 1 dataset

Motif DE_36h DE_36h-RARARXRA_MA0159.1 17 bp overlap

RARA::RXRG 1 dataset

Motif DE_36h DE_36h-RARARXRG_MA1149.2 17 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 83 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 482 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 547 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 358 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 353 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 489 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 258 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 346 bp overlap

SNAI1 1 dataset

Motif DE_36h DE_36h-SNAI1_MA1558.2 7 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 220 bp overlap

TCF12 1 dataset

Motif DE_36h DE_36h-TCF12_MA1648.2 7 bp overlap

TCF3 1 dataset

Motif DE_36h DE_36h-TCF3_MA0522.4 7 bp overlap

TCF4 1 dataset

Motif DE_36h DE_36h-TCF4_MA0830.3 8 bp overlap

TCF7L1 1 dataset

Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap

TRPS1 1 dataset

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

Tbx6 1 dataset

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap

ZBTB7C 1 dataset

Motif DE_36h DE_36h-ZBTB7C_MA0695.2 8 bp overlap

ZEB1 1 dataset

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZIC4 1 dataset

Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap

ZNF324 1 dataset

Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap

ZNF449 1 dataset

Motif DE_36h DE_36h-ZNF449_MA1656.2 10 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 176 bp overlap

ZNF530 1 dataset

Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap

ZSCAN4 1 dataset

Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap