chr11 : 4,722,617 – 4,723,156
539 bp 80 TFs 1 linked gene
This 539 bp open chromatin element is linked to KRT8P49 and is bound by 80 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
KRT8P49 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:4,717,617 – 4,728,156
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
ASCL1 3 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap
CTCF 97 datasets
ChIP 22Rv1 ENCFF466OXN 509 bp overlap
ChIP 22Rv1 ENCFF466OXN 308 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 163 bp overlap
ChIP A549 ENCFF034FVO 312 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP C4-2B ENCFF821XVN 539 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 166 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP DND-41 ENCFF913MRA 299 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 151 bp overlap
ChIP GM06990 ENCFF471OQT 297 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 137 bp overlap
ChIP GM10266 ENCFF241YYF 177 bp overlap
ChIP GM12864 ENCFF357DQE 265 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 137 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 166 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 139 bp overlap
ChIP GM12873 ENCFF711LOS 274 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 120 bp overlap
ChIP GM12874 ENCFF942MTD 261 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 164 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM20000 ENCFF217HWJ 165 bp overlap
ChIP GM23338 ENCFF531QOI 195 bp overlap
ChIP GM23338 ENCFF772DML 182 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 183 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 335 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 183 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 226 bp overlap
ChIP HCT116 ENCFF003KHP 370 bp overlap
ChIP HCT116 ENCFF209YMI 284 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 184 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 165 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 332 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 191 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 174 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 176 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 129 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 81 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF194VBQ 295 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 313 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 264 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 254 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 182 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 150 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 144 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 111 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 277 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 141 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 262 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP K562 ENCFF400DFR 241 bp overlap
ChIP K562 ENCFF430KTH 124 bp overlap
ChIP K562 ENCFF598YSU 271 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 213 bp overlap
ChIP MCF-7 ENCFF139NQI 277 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 162 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 124 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 132 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 191 bp overlap
ChIP NB4 ENCFF155DNY 251 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 118 bp overlap
ChIP PC-3 ENCFF487TUI 382 bp overlap
ChIP Panc1 ENCFF056JQX 493 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 420 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 157 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 127 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 202 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 136 bp overlap
ChIP WTC11 ENCFF658QVH 363 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 165 bp overlap
ChIP endodermal cell ENCFF471YCZ 367 bp overlap
ChIP endodermal cell ENCFF471YCZ 187 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 185 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 133 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 140 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 126 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 164 bp overlap
ChIP neural progenitor cell ENCFF420RBO 185 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 117 bp overlap
ERF 1 dataset
Motif DE_12h DE_12h-ERF_MA0760.2 9 bp overlap
ERF::FIGLA 1 dataset
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
ERF::FOXI1 1 dataset
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ERF::NHLH1 1 dataset
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
ETS1 1 dataset
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV2::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 192 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GLI3 1 dataset
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
GLIS2 1 dataset
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
GLIS3 1 dataset
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HSF4 1 dataset
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
Motif ES_0h ES_0h-MEIS2_MA0774.1 8 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOD1 2 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 118 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HCT116 ENCFF568PEO 293 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 135 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
TFAP4::FLI1 3 datasets
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif ES_0h ES_0h-TFAP4FLI1_MA1967.2 14 bp overlap
TP63 2 datasets
Motif DE_12h DE_12h-TP63_MA0525.2 18 bp overlap
Motif ES_0h ES_0h-TP63_MA0525.2 18 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
ZBED1 2 datasets
Motif DE_12h DE_12h-ZBED1_MA0749.2 12 bp overlap
Motif ES_0h ES_0h-ZBED1_MA0749.2 12 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 126 bp overlap
ZBTB7C 2 datasets
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF343 2 datasets
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZSCAN29 1 dataset
Motif DE_12h DE_12h-ZSCAN29_MA1602.2 11 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
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