chr10 : 120,940,428 – 120,940,822
394 bp 32 TFs 0 linked genes
This 394 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:120,935,428 – 120,945,822
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 8 datasets
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 98 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 91 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 77 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 231 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 150 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 394 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 129 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 53 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 104 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 280 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 200 bp overlap
CTCF 94 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 235 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 262 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 117 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 312 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 212 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 156 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 91 bp overlap
ChIP GM12872 ENCFF697BYI 142 bp overlap
ChIP GM12878 ENCFF511URZ 169 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 50 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 134 bp overlap
ChIP GM23338 ENCFF531QOI 119 bp overlap
ChIP GM23338 ENCFF772DML 129 bp overlap
ChIP H1 ENCFF414GZI 149 bp overlap
ChIP H1 ENCFF764RHO 72 bp overlap
ChIP H9 ENCFF152GTF 173 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 110 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 122 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 167 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 166 bp overlap
ChIP HCT116 ENCFF003KHP 258 bp overlap
ChIP HCT116 ENCFF209YMI 159 bp overlap
ChIP HEK293 ENCFF498RMM 160 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 85 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 123 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 177 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 187 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 134 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 143 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 103 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 171 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 147 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 111 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 213 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 175 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 122 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 113 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 102 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 218 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 146 bp overlap
ChIP MCF-7 ENCFF198DQX 129 bp overlap
ChIP MCF-7 ENCFF210JUZ 284 bp overlap
ChIP MCF-7 ENCFF494VXA 129 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 172 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 136 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 100 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 110 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 168 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 144 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 286 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 189 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 267 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 168 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 150 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 207 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 119 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 377 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 193 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 94 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 114 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 158 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 78 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 114 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 164 bp overlap
ChIP endodermal cell ENCFF471YCZ 177 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 169 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 88 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 222 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 129 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 139 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 149 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 116 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 98 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 134 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 68 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 95 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 78 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 103 bp overlap
ChIP keratinocyte ENCFF046PBT 123 bp overlap
ChIP keratinocyte ENCFF291YDC 123 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 394 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 146 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 125 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 113 bp overlap
ChIP neural progenitor cell ENCFF420RBO 158 bp overlap
ChIP neural progenitor cell ENCFF581WPG 344 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 195 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 102 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 153 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 131 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 114 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 109 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 250 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 394 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 130 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 315 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 394 bp overlap
ChIP T98G GSE112240.EZH2.T98G 61 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 220 bp overlap
FOXA1 2 datasets
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 232 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 92 bp overlap
GATA6 1 dataset
ChIP PATU8988 GSE47535.GATA6.PATU8988 189 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 341 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 355 bp overlap
HNF4A 3 datasets
ChIP IM95 GSE114018.HNF4A.IM95 102 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 159 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 160 bp overlap
KLF5 2 datasets
ChIP GP5D GSE51234.KLF5.GP5D 320 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 136 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 394 bp overlap
MYCN 1 dataset
ChIP Kelly_res GSE115249.MYCN.Kelly_res 154 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 137 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BJR.NR3C1.A-549 116 bp overlap
ChIP A-549 ENCSR000BHF.NR3C1.A-549 205 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 394 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 227 bp overlap
RAD21 9 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 128 bp overlap
ChIP H1 ENCFF698EWO 175 bp overlap
ChIP H1 ENCFF967OJF 203 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 238 bp overlap
ChIP Ishikawa ENCFF570JVV 136 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 112 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 306 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 165 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 126 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 184 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 305 bp overlap
SMARCC1 1 dataset
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 379 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 211 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 180 bp overlap
SPI1 1 dataset
ChIP K-562 ENCSR000BGW.SPI1.K-562 82 bp overlap
STAG1 5 datasets
ChIP HL-60 GSE131577.STAG1.HL-60 84 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 170 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 170 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 146 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 137 bp overlap
STAG2 1 dataset
ChIP HL-60 GSE131577.STAG2.HL-60 91 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 289 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 357 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 73 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 131 bp overlap
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