chr10 : 101,960,808 – 101,961,342
534 bp 47 TFs 10 linked genes
This 534 bp open chromatin element is linked to 10 target genes and is bound by 47 transcription factors.
Linked Genes
10 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ARMH3 95.1 kb Distal Multiome
HPS6 104.2 kb Distal Multiome
OGA 142.7 kb Distal Multiome
LDB1 153.8 kb Distal Multiome
PPRC1 171.9 kb Distal Multiome
NPM3 177.7 kb Distal Multiome
FGF8 180.8 kb Distal Multiome
NOLC1 191.3 kb Distal Multiome
FBXW4 266.0 kb Distal Multiome
GBF1 284.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:101,955,808 – 101,966,342
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
ATF6 1 dataset
Motif DE_48h DE_48h-ATF6_MA1466.2 13 bp overlap
BRD4 1 dataset
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 328 bp overlap
CREB3L1 1 dataset
Motif DE_48h DE_48h-CREB3L1_MA0839.2 13 bp overlap
CTCF 4 datasets
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif DE_72h DE_72h-CTCF_MA0139.2 15 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 399 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 108 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 433 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 194 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 129 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 182 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 531 bp overlap
ChIP DE DE-FOXA2-2 324 bp overlap
GATA2 4 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 209 bp overlap
GATA4 11 datasets
ChIP DE DE-GATA4-1 527 bp overlap
ChIP DE DE-GATA4-2 534 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP G296S GSE85628.GATA4.G296S 230 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 230 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 265 bp overlap
ChIP foregut GSE117136.GATA4.foregut 327 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 363 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 333 bp overlap
GATA5 3 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 534 bp overlap
ChIP DE DE-GATA6-2 525 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 435 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 534 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 416 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 534 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 519 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 425 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 457 bp overlap
ChIP foregut GSE117136.GATA6.foregut 267 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 286 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 269 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 286 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 400 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 274 bp overlap
MAFK 2 datasets
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF743ZOF 241 bp overlap
MECOM 1 dataset
ChIP SKH1 GSE102697.MECOM.SKH1 191 bp overlap
Mecom 3 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 466 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 157 bp overlap
POLR2A 1 dataset
ChIP gastrocnemius medialis ENCFF145VIB 108 bp overlap
PRDM9 2 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
REST 1 dataset
Motif DE_48h DE_48h-REST_MA0138.3 20 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 417 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 315 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 183 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 433 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 299 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 380 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 137 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 124 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 208 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 257 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 267 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 412 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 217 bp overlap
TBX18 3 datasets
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_72h DE_72h-TBX18_MA1565.2 9 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 270 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 107 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZKSCAN5 3 datasets
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF135 2 datasets
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
ZNF257 3 datasets
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap
ZNF317 3 datasets
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
Motif DE_72h DE_72h-ZNF317_MA1593.2 8 bp overlap
ZNF574 3 datasets
Motif DE_36h DE_36h-ZNF574_MA1982.2 14 bp overlap
Motif DE_48h DE_48h-ZNF574_MA1982.2 14 bp overlap
Motif DE_48h DE_48h-ZNF574_MA1982.2 14 bp overlap
ZNF768 1 dataset
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Zic1::Zic2 1 dataset
Motif DE_48h DE_48h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_48h DE_48h-Zic3_MA0697.3 7 bp overlap
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