Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

61 transcription factors

DMRT3 1 dataset

Motif DE_24h DE_24h-DMRT3_MA0610.2 7 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 319 bp overlap

EHF 1 dataset

Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap

EHMT2 1 dataset

ChIP A549 ENCFF026GWM 80 bp overlap

ELF1 1 dataset

Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 268 bp overlap

ERF::FOXI1 1 dataset

Motif DE_24h DE_24h-ERFFOXI1_MA1935.2 10 bp overlap

ETV1 1 dataset

Motif DE_24h DE_24h-ETV1_MA0761.3 9 bp overlap

EZH2 1 dataset

ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 112 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 519 bp overlap

Erg 1 dataset

Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap

FOXA1 2 datasets

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 249 bp overlap

ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 176 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 525 bp overlap

ChIP DE DE-FOXA2-2 457 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_24h DE_24h-FOXJ2ELF1_MA1952.2 11 bp overlap

GABPA 1 dataset

Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 465 bp overlap

ChIP DE DE-GATA4-2 466 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 435 bp overlap

ChIP DE DE-GATA6-2 414 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 498 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 520 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 525 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 290 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 466 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 487 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 418 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 279 bp overlap

IKZF1 1 dataset

Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_24h DE_24h-Ikzf3_MA1992.2 9 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 453 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 525 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 525 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 447 bp overlap

MYB 1 dataset

Motif DE_24h DE_24h-MYB_MA0100.4 6 bp overlap

MYF6 1 dataset

Motif DE_24h DE_24h-MYF6_MA0667.1 10 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_24h DE_24h-Nr1h3Rxra_MA0494.2 16 bp overlap

OSR2 3 datasets

ChIP HEK293 ENCFF875BDB 404 bp overlap

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 205 bp overlap

ChIP HEK293 GSE76494.OSR2.HEK293 181 bp overlap

PATZ1 1 dataset

ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 290 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 263 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 314 bp overlap

REST 4 datasets

ChIP H1 ENCFF203SWY 435 bp overlap

ChIP PANC-1 ENCSR000BJO.REST.PANC-1 223 bp overlap

ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 278 bp overlap

ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 249 bp overlap

Rarg 1 dataset

Motif DE_24h DE_24h-Rarg_MA0860.1 17 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 194 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 473 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 510 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 525 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 483 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 525 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 525 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 499 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 379 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 141 bp overlap

SMARCA4 1 dataset

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 54 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 325 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 292 bp overlap

SP7 2 datasets

ChIP HEK293 ENCFF733RBE 477 bp overlap

ChIP HEK293 ENCSR468IJT.SP7.HEK293 363 bp overlap

THRA 1 dataset

Motif DE_24h DE_24h-THRA_MA1969.2 18 bp overlap

ZBTB17 2 datasets

ChIP HEK293 ENCFF865LIO 525 bp overlap

ChIP HEK293 ENCFF865LIO 331 bp overlap

ZBTB21 2 datasets

ChIP HEK293 ENCFF509WYZ 159 bp overlap

ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 381 bp overlap

ZEB1 1 dataset

ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 399 bp overlap

ZEB2 1 dataset

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 235 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 204 bp overlap

ZIC1 1 dataset

Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 134 bp overlap

ZKSCAN5 1 dataset

Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF135 2 datasets

Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap

Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap

ZNF175 1 dataset

Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap

ZNF189 2 datasets

ChIP HEK293 ENCFF638TIB 475 bp overlap

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 339 bp overlap

ZNF24 1 dataset

ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 347 bp overlap

ZNF398 2 datasets

ChIP HEK293 ENCFF184XEW 408 bp overlap

ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 312 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 188 bp overlap

ZNF629 2 datasets

ChIP HEK293 ENCFF096ELQ 240 bp overlap

ChIP HEK293 ENCSR351NON.ZNF629.HEK293 388 bp overlap

ZNF639 1 dataset

ChIP HEK293 ENCSR080CST.ZNF639.HEK293 249 bp overlap

ZNF660 2 datasets

ChIP HEK293 ENCFF282RUS 344 bp overlap

ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 400 bp overlap

Zic1::Zic2 1 dataset

Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap

Genome Browser