chr10 : 84,088,828 84,089,021
193 bp 39 TFs 1 linked gene
This 193 bp open chromatin element is linked to HMGN2P8 and is bound by 39 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HMGN2P8 7.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:84,083,828 – 84,094,021
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 191 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 193 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 79 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 193 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 118 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF829RWA 112 bp overlap
ChIP SK-N-SH ENCFF829RWA 193 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 147 bp overlap
ChIP neural cell ENCFF442QNK 193 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 193 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 193 bp overlap
ChIP DE DE-FOXA2-2 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 193 bp overlap
GATA2 6 datasets
ChIP SH-SY5Y ENCFF485YIB 193 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 193 bp overlap
ChIP SK-N-SH ENCFF764OZD 193 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 187 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 193 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 57 bp overlap
GATA3 6 datasets
ChIP BE2C GSE65664.GATA3.BE2C 147 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 80 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 193 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 193 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 193 bp overlap
ChIP SK-N-SH ENCFF040SSB 177 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 193 bp overlap
ChIP DE DE-GATA4-2 193 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 193 bp overlap
ChIP foregut GSE117136.GATA4.foregut 193 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 193 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 193 bp overlap
ChIP DE DE-GATA6-2 193 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 193 bp overlap
ChIP foregut GSE117136.GATA6.foregut 173 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 193 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 193 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 188 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 193 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 193 bp overlap
KDM1A 4 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 193 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 183 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 193 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 193 bp overlap
MED1 4 datasets
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 123 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 161 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 91 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 138 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 193 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 57 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 94 bp overlap
MYCN 10 datasets
ChIP BE2C GSE80151.MYCN.BE2C 110 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 193 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 193 bp overlap
ChIP Kelly GSE80151.MYCN.Kelly 70 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 134 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 193 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 159 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 153 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 110 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 193 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 116 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 193 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 193 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 184 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 193 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 193 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 193 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 193 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 78 bp overlap
RAD21 1 dataset
ChIP neural cell ENCFF564MOT 193 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 152 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 193 bp overlap
SMARCA4 5 datasets
ChIP NGP GSE134626.SMARCA4.NGP 193 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 126 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 193 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 136 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 101 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 61 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 193 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 193 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 111 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 193 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 193 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 176 bp overlap
TOX2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 193 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 86 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 53 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 193 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 193 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 86 bp overlap
ZFP30 1 dataset
ChIP SK-N-SH ENCFF375XBD 141 bp overlap