Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

62 transcription factors

Arx 2 datasets

Motif DE_48h DE_48h-Arx_MA0874.2 10 bp overlap

Motif DE_60h DE_60h-Arx_MA0874.2 10 bp overlap

BARX1 2 datasets

Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BSX 2 datasets

Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CBX8 1 dataset

ChIP K-562 ENCSR000ATW.CBX8.K-562 232 bp overlap

DLX1 2 datasets

Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx3 2 datasets

Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

EN2 2 datasets

Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap

Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap

ETV7 2 datasets

Motif DE_60h DE_60h-ETV7_MA1708.2 9 bp overlap

Motif DE_72h DE_72h-ETV7_MA1708.2 9 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCFF528YED 231 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 505 bp overlap

ChIP DE DE-FOXA2-2 497 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 414 bp overlap

ChIP DE DE-GATA4-2 426 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA5 2 datasets

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 400 bp overlap

ChIP DE DE-GATA6-2 452 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 375 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 442 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 344 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 375 bp overlap

GBX1 2 datasets

Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap

Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap

GBX2 2 datasets

Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 2 datasets

Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

Hmx2 2 datasets

Motif DE_48h DE_48h-Hmx2_MA0897.2 15 bp overlap

Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCFF518OXG 368 bp overlap

LBX1 2 datasets

Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap

Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap

LBX2 2 datasets

Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

LHX9 2 datasets

Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap

Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap

Lef1 2 datasets

Motif DE_48h DE_48h-Lef1_MA0768.3 8 bp overlap

Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap

MSX1 2 datasets

Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

MYNN 1 dataset

ChIP HEK293 ENCFF897QZG 131 bp overlap

Msx3 2 datasets

Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NR2C1 2 datasets

Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap

Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap

NR2C2 2 datasets

Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap

Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap

Nobox 2 datasets

Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

Nr1H2 2 datasets

Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap

Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 2 datasets

Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap

Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 2 datasets

Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap

Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap

OSR2 1 dataset

ChIP HEK293 ENCFF875BDB 385 bp overlap

PKNOX2 2 datasets

Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap

Motif DE_72h DE_72h-PKNOX2_MA0783.1 12 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_60h DE_60h-POU2F1SOX2_MA1962.1 17 bp overlap

PPARG 1 dataset

Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 497 bp overlap

PRRX2 2 datasets

Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap

Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAX 2 datasets

Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

RNF2 1 dataset

ChIP K-562 ENCSR820GND.RNF2.K-562 250 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 261 bp overlap

SOX14 1 dataset

Motif DE_60h DE_60h-SOX14_MA1562.2 9 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 398 bp overlap

SOX8 1 dataset

Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap

Sox5 1 dataset

Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap

TCF7L2 1 dataset

ChIP HEK293 ENCFF513JQN 505 bp overlap

WT1 1 dataset

ChIP HEK293 ENCFF906HIR 379 bp overlap

ZBTB48 1 dataset

ChIP HEK293 ENCFF809BPK 465 bp overlap

ZNF281 2 datasets

Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap

Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCFF784SLD 131 bp overlap

ZNF34 2 datasets

ChIP HEK293 ENCFF481TFV 425 bp overlap

ChIP HEK293 ENCFF481TFV 417 bp overlap

ZNF362 3 datasets

ChIP HEK293 ENCFF436CGE 384 bp overlap

ChIP HEK293 ENCFF436CGE 184 bp overlap

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 253 bp overlap

ZNF384 2 datasets

ChIP HEK293T ENCFF019DZX 333 bp overlap

ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 208 bp overlap

ZSCAN16 1 dataset

ChIP HEK293 ENCFF533NFT 361 bp overlap

ZSCAN30 1 dataset

ChIP HEK293 ENCFF082YBI 337 bp overlap

ZXDB 1 dataset

ChIP HEK293 ENCFF835SGA 484 bp overlap

Genome Browser