chr10 : 63,469,132 63,469,618
486 bp 43 TFs 2 linked genes
This 486 bp open chromatin element is linked to JMJD1C and JMJD1C-AS1 and is bound by 43 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
JMJD1C 3.2 kb Proximal Proximity
JMJD1C-AS1 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:63,464,132 – 63,474,618
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 64 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 179 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 331 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 160 bp overlap
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 276 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 386 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 302 bp overlap
BRD3 1 dataset
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD3.THP-1_iBET-BD2-PMA 486 bp overlap
BRD4 5 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 272 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 486 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 486 bp overlap
ChIP SEM GSE83671.BRD4.SEM 486 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 214 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 486 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 453 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 464 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 153 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE41561.ESR1.MCF-7 179 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 424 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 231 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 264 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 326 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 219 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 269 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 270 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 326 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 160 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 241 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 420 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 244 bp overlap
FOXA1 46 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 221 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 180 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 177 bp overlap
ChIP A1A3_EtOH GSE112491.FOXA1.A1A3_EtOH 398 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 243 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 315 bp overlap
ChIP HepG2 ENCFF207NVJ 101 bp overlap
ChIP HepG2 ENCFF361KNY 251 bp overlap
ChIP HepG2 ENCFF740VZW 217 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 195 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 182 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 171 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 329 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 138 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 316 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 294 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 249 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 205 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 131 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 125 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 186 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 267 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 211 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 254 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 224 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 286 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 283 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 212 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 280 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 256 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 292 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 259 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 285 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 247 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 340 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 308 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 328 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 191 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 194 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 257 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 217 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 166 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 197 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 182 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 190 bp overlap
FOXA2 14 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 273 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 235 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 414 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 338 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 324 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 170 bp overlap
ChIP DE DE-FOXA2-1 479 bp overlap
ChIP DE DE-FOXA2-2 486 bp overlap
ChIP HepG2 ENCFF533COJ 231 bp overlap
ChIP HepG2 ENCFF570ABM 316 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 302 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 319 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 234 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 139 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 135 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 203 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 203 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 202 bp overlap
GATA3 3 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 231 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 372 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 314 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 300 bp overlap
ChIP DE DE-GATA4-1 486 bp overlap
ChIP DE DE-GATA4-2 486 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 281 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 486 bp overlap
ChIP DE DE-GATA6-2 486 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 409 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 486 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 468 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 486 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 439 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 361 bp overlap
ChIP PANC-1 GSE119930.HOXB8.PANC-1 154 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 282 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 386 bp overlap
ChIP L826 GSE83671.KMT2A.L826 458 bp overlap
ChIP MOLM-13_DMSO-D3-180110 GSE127507.KMT2A.MOLM-13_DMSO-D3-180110 293 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 241 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 335 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 102 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 147 bp overlap
ChIP K562 ENCFF320GSD 214 bp overlap
MEN1 5 datasets
ChIP ML-2_DMSO-180619 GSE127507.MEN1.ML-2_DMSO-180619 231 bp overlap
ChIP MOLM-13_EPZ5676 GSE149183.MEN1.MOLM-13_EPZ5676 281 bp overlap
ChIP MOLM-13_compound10 GSE149183.MEN1.MOLM-13_compound10 471 bp overlap
ChIP MOLM-13_compound11 GSE149183.MEN1.MOLM-13_compound11 433 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 454 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 115 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 389 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 216 bp overlap
ChIP K562 ENCFF286KMN 343 bp overlap
PKNOX1 8 datasets
ChIP GM12878 ENCFF589FCY 85 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 178 bp overlap
ChIP HEK293T ENCFF174WDB 126 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 184 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 226 bp overlap
ChIP K562 ENCFF236IUS 172 bp overlap
ChIP MCF-7 ENCFF116OCS 197 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 191 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 219 bp overlap
PSIP1 2 datasets
ChIP ML-2 GSE95511.PSIP1.ML-2 486 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 269 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 486 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 486 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 391 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 334 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 430 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 474 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 485 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 269 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 410 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 372 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 264 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 290 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 163 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 158 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 185 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 287 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 275 bp overlap