chr10 : 49,701,102 – 49,701,349
247 bp 43 TFs 0 linked genes
This 247 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:49,696,102 – 49,706,349
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 215 bp overlap
CTCF 105 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 195 bp overlap
ChIP A673 ENCFF123WOM 247 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 144 bp overlap
ChIP Caco-2 ENCFF934QYS 146 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 95 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
ChIP GM23338 ENCFF531QOI 95 bp overlap
ChIP GM23338 ENCFF772DML 144 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 247 bp overlap
ChIP H1 ENCFF414GZI 207 bp overlap
ChIP H1 ENCFF764RHO 75 bp overlap
ChIP H9 ENCFF152GTF 191 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 97 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 178 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 154 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 208 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 128 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 196 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 198 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 139 bp overlap
ChIP HCT116 ENCFF209YMI 148 bp overlap
ChIP HCT116 ENCFF373YMA 227 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 81 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 96 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 152 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 129 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 115 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 226 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 229 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 173 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 176 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 159 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 159 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 170 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 114 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 184 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 88 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 155 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 164 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 105 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 223 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 174 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 199 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 162 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 122 bp overlap
ChIP Loucy ENCFF359TVQ 247 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 184 bp overlap
ChIP MCF-7 ENCFF139NQI 212 bp overlap
ChIP MCF-7 ENCFF162GNE 170 bp overlap
ChIP MCF-7 ENCFF198DQX 60 bp overlap
ChIP MCF-7 ENCFF210JUZ 113 bp overlap
ChIP MCF-7 ENCFF414SZG 163 bp overlap
ChIP MCF-7 ENCFF494VXA 60 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 247 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 208 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 157 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 182 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 182 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 94 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 146 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 111 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 223 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 200 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 201 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 208 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 194 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 135 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 125 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 218 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 247 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 194 bp overlap
ChIP PC-3 ENCFF487TUI 139 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 236 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 153 bp overlap
ChIP VCaP ENCFF858YQT 247 bp overlap
ChIP VCaP ENCFF858YQT 247 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 247 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 226 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 140 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 172 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 103 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 170 bp overlap
ChIP endodermal cell ENCFF471YCZ 191 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 125 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 173 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 230 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 148 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 157 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 104 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 130 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 130 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 148 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 192 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 124 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 192 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 105 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 209 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 196 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 163 bp overlap
ChIP neural progenitor cell ENCFF420RBO 247 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 173 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 181 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 136 bp overlap
CTCFL 4 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 169 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 201 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 141 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 189 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 137 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000AUQ.EP300.WA01 115 bp overlap
ESR1 11 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 182 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 111 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 188 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 204 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 202 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 187 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 184 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 180 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 192 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 194 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 192 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 194 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 247 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 247 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 242 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 178 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 226 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 247 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 247 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 234 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 201 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 163 bp overlap
RAD21 26 datasets
ChIP H1 ENCFF698EWO 181 bp overlap
ChIP H1 ENCFF967OJF 202 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 157 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 197 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 166 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 232 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 204 bp overlap
ChIP HCT116 ENCFF568PEO 205 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 247 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 175 bp overlap
ChIP Ishikawa ENCFF570JVV 156 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 186 bp overlap
ChIP MCF-7 ENCFF694KOM 224 bp overlap
ChIP MCF-7 ENCFF724VCQ 187 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 219 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 149 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 193 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 174 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 184 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 131 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 216 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 175 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 212 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 114 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 190 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 169 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 123 bp overlap
SIX1 3 datasets
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF587VYG 247 bp overlap
SIX2 4 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 247 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 247 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 247 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 247 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 156 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 172 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 173 bp overlap
SMC1A 2 datasets
ChIP MCF-7 GSE76893.SMC1A.MCF-7 152 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 149 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 203 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 196 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 160 bp overlap
Six4 1 dataset
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 247 bp overlap
ZBTB11 1 dataset
ChIP HEK293 ENCFF262GZJ 247 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 94 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 187 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 223 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 247 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 125 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 146 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 247 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 247 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 231 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 141 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 209 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 157 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 146 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 247 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 205 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 192 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 129 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 100 bp overlap
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