chr10 : 47,383,339 47,383,562
223 bp 36 TFs 1 linked gene
This 223 bp open chromatin element is linked to ZNF488 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ZNF488 730 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:47,378,339 – 47,388,562
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ASCL1 5 datasets
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 205 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 199 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 198 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 223 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 169 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 156 bp overlap
BRD4 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 77 bp overlap
CEBPB 3 datasets
ChIP Ishikawa ENCFF010USJ 223 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 110 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 139 bp overlap
EGR1 2 datasets
ChIP Ishikawa ENCFF550FKT 223 bp overlap
ChIP Ishikawa ENCSR000BSQ.EGR1.Ishikawa 164 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 223 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 223 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 223 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 223 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 139 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 171 bp overlap
ESR1 9 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 178 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 171 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 219 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 145 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 223 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 194 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 187 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 185 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 223 bp overlap
EZH2 2 datasets
ChIP SF8628 GSE94834.EZH2.SF8628 222 bp overlap
ChIP neural progenitor cell ENCFF472NFV 223 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 197 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 204 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 223 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 223 bp overlap
KLF9 1 dataset
ChIP MCF-7 ENCFF618FCM 223 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 129 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 223 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 223 bp overlap
MYB 1 dataset
ChIP PF-382 GSE94000.MYB.PF-382 223 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 218 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCFF029AAD 223 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 84 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 223 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 191 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 223 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 223 bp overlap
SIN3A 3 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 223 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 125 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 141 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 223 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 186 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 178 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 223 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 223 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap
TCF12 4 datasets
ChIP H1 ENCFF203EBH 214 bp overlap
ChIP Ishikawa ENCFF467DDW 223 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 223 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 212 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 223 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 147 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCFF191NFH 223 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 157 bp overlap
ZEB1 2 datasets
ChIP PDAC GSE64557.ZEB1.PDAC 220 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 120 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 223 bp overlap