chr10 : 10,165,261 – 10,165,693
432 bp 80 TFs 0 linked genes
This 432 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:10,160,261 – 10,170,693
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 57 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BARX2 1 dataset
Motif ES_0h ES_0h-BARX2_MA1471.2 9 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 103 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 212 bp overlap
BRD4 3 datasets
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 178 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 166 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 432 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CEBPA 2 datasets
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 327 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 214 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 211 bp overlap
CTCF 6 datasets
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 122 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 183 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 188 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 279 bp overlap
ChIP neural cell ENCFF335ADI 327 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 314 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
DMRTA1 1 dataset
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTC2 1 dataset
Motif ES_0h ES_0h-DMRTC2_MA1479.2 11 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
EP300 3 datasets
ChIP hESC GSE17917.EP300.hESC 283 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 278 bp overlap
ChIP neural cell ENCFF442QNK 130 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 124 bp overlap
FOXA1 2 datasets
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 67 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 156 bp overlap
FOXO1::ELF1 1 dataset
Motif ES_0h ES_0h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 1 dataset
Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 129 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 65 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 273 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 176 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 303 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 233 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 157 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LIN54 2 datasets
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 165 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MEIS1 4 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 219 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 218 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 199 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 432 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 364 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 206 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 432 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 432 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 358 bp overlap
ChIP hESC GSE20650.NANOG.hESC 239 bp overlap
ChIP hESC GSE18292.NANOG.hESC 154 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 196 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 224 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 199 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 192 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 172 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 137 bp overlap
POU2F1::SOX2 3 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 2 datasets
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 256 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 58 bp overlap
POU5F1 11 datasets
ChIP GM23338 ENCFF333SNB 232 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 432 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 332 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 432 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 286 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 173 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 228 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 216 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 351 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 259 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 265 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 2 datasets
ChIP neural ENCSR198ZYJ.RAD21.neural 322 bp overlap
ChIP neural cell ENCFF564MOT 339 bp overlap
RARA::RXRA 2 datasets
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 183 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
Rhox11 1 dataset
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 384 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 229 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 224 bp overlap
SMAD2_3 1 dataset
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 229 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 166 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 200 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 156 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 137 bp overlap
SMARCA4 4 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 330 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 132 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 235 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 360 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 336 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 343 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 245 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 395 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 385 bp overlap
ChIP neural cell ENCFF795YGY 355 bp overlap
SOX13 2 datasets
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX18 1 dataset
Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap
SOX2 4 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP hESC GSE18292.SOX2.hESC 83 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 285 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 270 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 161 bp overlap
ChIP WTC11 ENCFF688PEU 404 bp overlap
SRY 1 dataset
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
Sox1 3 datasets
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Motif ES_0h ES_0h-Sox1_MA0870.1 15 bp overlap
Motif ES_0h ES_0h-Sox1_MA0870.1 15 bp overlap
Sox17 2 datasets
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox3 2 datasets
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Sox5 2 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox7 2 datasets
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 235 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 125 bp overlap
ZBTB26 1 dataset
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
ZNF140 2 datasets
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 275 bp overlap
ZNF547 2 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF768 2 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
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