chr9 : 16,983,399 – 16,984,133

734 bp 55 TFs 1 linked gene

This 734 bp open chromatin element is linked to ENSG00000285169 and is bound by 55 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000285169		at TSS	At TSS	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

55 transcription factors

BRD4 1 dataset

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 194 bp overlap

CHD2 2 datasets

ChIP H1 ENCFF991MKH 331 bp overlap

ChIP HepG2 ENCFF968LAV 317 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 592 bp overlap

Crx 1 dataset

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

DUX4 1 dataset

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

E2F6 2 datasets

Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 184 bp overlap

E2F7 1 dataset

Motif DE_36h DE_36h-E2F7_MA0758.1 14 bp overlap

EZH2 1 dataset

ChIP THP-1 GSE135024.EZH2.THP-1 214 bp overlap

FIGLA 1 dataset

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 386 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 257 bp overlap

ChIP DE DE-GATA6-2 398 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 432 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 295 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 282 bp overlap

GSC 1 dataset

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

Gfi1B 1 dataset

Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap

HAND2 1 dataset

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap

KLF11 1 dataset

Motif DE_36h DE_36h-KLF11_MA1512.2 10 bp overlap

KLF13 1 dataset

Motif DE_36h DE_36h-KLF13_MA0657.2 17 bp overlap

KLF16 1 dataset

Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap

KLF9 1 dataset

Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 240 bp overlap

OTX1 1 dataset

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 143 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

PITX1 1 dataset

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 271 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 183 bp overlap

RBPJ 1 dataset

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

RELA 1 dataset

ChIP 786-O GSE86092.RELA.786-O 199 bp overlap

RHOXF1 1 dataset

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 405 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 329 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 468 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 355 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 605 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 296 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 328 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 281 bp overlap

SP8 1 dataset

Motif DE_36h DE_36h-SP8_MA0747.2 11 bp overlap

TAL1 1 dataset

ChIP PRIMA5 GSE33850.TAL1.PRIMA5 181 bp overlap

TWIST1 1 dataset

Motif DE_36h DE_36h-TWIST1_MA1123.3 8 bp overlap

Tbx6 1 dataset

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

Thap11 1 dataset

Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap

USF1 3 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 225 bp overlap

ChIP WTC11 ENCFF699QGS 425 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 417 bp overlap

ZBTB18 1 dataset

Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap

ZBTB33 1 dataset

Motif DE_36h DE_36h-ZBTB33_MA0527.2 10 bp overlap

ZEB1 1 dataset

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZIC1 1 dataset

Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap

ZNF136 1 dataset

Motif DE_36h DE_36h-ZNF136_MA1588.1 15 bp overlap

ZNF189 1 dataset

Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap

ZNF341 1 dataset

Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap

ZNF677 1 dataset

Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap

ZNF701 1 dataset

Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap

ZNF766 1 dataset

ChIP HEK293T GSE78099.ZNF766.HEK293T 235 bp overlap