chr8 : 126,885,382 – 126,885,571
189 bp 45 TFs 1 linked gene
This 189 bp open chromatin element is linked to PCAT1 and is bound by 45 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PCAT1 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:126,880,382 – 126,890,571
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 182 bp overlap
BRD2 3 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 189 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 189 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 105 bp overlap
BRD4 1 dataset
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 189 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 121 bp overlap
CTCF 4 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 143 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 84 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 189 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 94 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 185 bp overlap
ERG 1 dataset
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 106 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 165 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 110 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 126 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 100 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 189 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 87 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 189 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 189 bp overlap
ChIP DE DE-FOXA2-2 189 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 136 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 189 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 189 bp overlap
ChIP DE DE-GATA4-2 189 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 189 bp overlap
ChIP DE DE-GATA6-2 189 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 189 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 189 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 189 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 189 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 189 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 189 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 189 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 189 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 58 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 157 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 132 bp overlap
MAF 1 dataset
ChIP keratinocyte_epidermal_PROLIF GSE52953.MAF.keratinocyte_epidermal_PROLIF 189 bp overlap
MAFB 1 dataset
ChIP keratinocyte_epidermal_PROLIF GSE52953.MAFB.keratinocyte_epidermal_PROLIF 122 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 187 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 167 bp overlap
MED1 1 dataset
ChIP myoblast GSE60026.MED1.myoblast 158 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 53 bp overlap
MYC 1 dataset
ChIP NCI-H128 GSE41105.MYC.NCI-H128 189 bp overlap
MYOD1 2 datasets
ChIP RD GSE137168.MYOD1.RD 124 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 177 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 189 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 133 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 122 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 189 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 188 bp overlap
RELA 1 dataset
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 158 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 189 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 189 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 189 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 179 bp overlap
SMARCA2 5 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 189 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 107 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 91 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 189 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 189 bp overlap
SMARCA4 2 datasets
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 188 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 189 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 189 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 189 bp overlap
STAT1 2 datasets
ChIP FaDu_BB608 GSE78212.STAT1.FaDu_BB608 135 bp overlap
ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 160 bp overlap
STAT3 5 datasets
ChIP HCC1937 GSE152203.STAT3.HCC1937 189 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 68 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 105 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 189 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 189 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 90 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 132 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 189 bp overlap
TP53 1 dataset
ChIP SaOS-2 GSE51268.TP53.SaOS-2 114 bp overlap
TP63 19 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 189 bp overlap
ChIP EP156T GSE43111.TP63.EP156T 186 bp overlap
ChIP HCC95 GSE46837.TP63.HCC95 99 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 116 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 189 bp overlap
ChIP HaCaT_dnRAS_TGFB GSE60814.TP63.HaCaT_dnRAS_TGFB 144 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 164 bp overlap
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 189 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 189 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 189 bp overlap
ChIP TT GSE46837.TP63.TT 139 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 189 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 189 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 189 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 189 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 189 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 189 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 189 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 163 bp overlap
TP73_DELTANP 1 dataset
ChIP SaOS-2 GSE15780.TP73_DELTANP.SaOS-2 189 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 189 bp overlap
TRIM28 6 datasets
ChIP HEK293 ENCFF265CEM 189 bp overlap
ChIP HEK293 ENCFF265CEM 146 bp overlap
ChIP HEK293 ENCFF582MWI 189 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 189 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 189 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 189 bp overlap
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