chr8 : 107,562,521 – 107,563,789
1,268 bp 63 TFs 0 linked genes
This 1.3 kb open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:107,557,521 – 107,568,789
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 137 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 205 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 157 bp overlap
CTCF 1 dataset
ChIP islet ERP004003.CTCF.islet 166 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 422 bp overlap
DMRT3 1 dataset
Motif DE_36h DE_36h-DMRT3_MA0610.2 7 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 195 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 179 bp overlap
ChIP hESC GSE26097.EOMES.hESC 183 bp overlap
ERF::FIGLA 1 dataset
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE48930.ESR1.MCF-7 167 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 209 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 193 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 1033 bp overlap
ChIP DE DE-FOXA2-2 372 bp overlap
ChIP DE DE-FOXA2-2 537 bp overlap
GATA2 1 dataset
ChIP SKH1 GSE87283.GATA2.SKH1 175 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 109 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 958 bp overlap
ChIP DE DE-GATA4-2 996 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 899 bp overlap
ChIP DE DE-GATA6-2 1023 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 394 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 957 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 949 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 978 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 485 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 332 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 793 bp overlap
ChIP foregut GSE117136.GATA6.foregut 305 bp overlap
Gli1 2 datasets
Motif DE_36h DE_36h-Gli1_MA1990.2 10 bp overlap
Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 274 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 326 bp overlap
HNF4A 3 datasets
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_48h DE_48h-HNF4A_MA0114.5 9 bp overlap
HNF4G 3 datasets
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_48h DE_48h-HNF4G_MA0484.3 9 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 308 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUND 1 dataset
ChIP PC-3 GSE29808.JUND.PC-3 277 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 206 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 258 bp overlap
NFATC3 2 datasets
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
NFATC4 2 datasets
Motif DE_36h DE_36h-NFATC4_MA1525.3 9 bp overlap
Motif DE_48h DE_48h-NFATC4_MA1525.3 9 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 169 bp overlap
NR1D2 2 datasets
Motif DE_36h DE_36h-NR1D2_MA1532.2 15 bp overlap
Motif DE_48h DE_48h-NR1D2_MA1532.2 15 bp overlap
NR4A1 3 datasets
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
Motif DE_48h DE_48h-NR4A1_MA1112.3 8 bp overlap
NR4A2 3 datasets
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
Motif DE_48h DE_48h-NR4A2_MA0160.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 189 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 1 dataset
ChIP hiPSC GSE56567.POU5F1.hiPSC 250 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 52 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 280 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 321 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 913 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 413 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 397 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 386 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 347 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 914 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 917 bp overlap
SOX10 3 datasets
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
SOX17 2 datasets
ChIP DE_D2 DED2-SOX17_Batch_II 325 bp overlap
ChIP DE_D2 DED2-SOX17_Batch_II 251 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 828 bp overlap
SOX2 2 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 292 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 263 bp overlap
SOX4 3 datasets
Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap
Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
Smad4 1 dataset
Motif DE_36h DE_36h-Smad4_MA1153.2 7 bp overlap
Sox11 2 datasets
Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap
Motif DE_48h DE_48h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Sox5 3 datasets
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Sox6 2 datasets
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 3 datasets
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 228 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 84 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
ZIC1 2 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_48h DE_48h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN1 2 datasets
Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF17 1 dataset
ChIP HEK293T GSE78099.ZNF17.HEK293T 211 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
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