chr8 : 94,549,688 94,550,096
408 bp 32 TFs 2 linked genes
This 408 bp open chromatin element is linked to VIRMA and VIRMA-DT and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
VIRMA 3.4 kb Proximal Proximity
VIRMA-DT 3.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:94,544,688 – 94,555,096
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K562 ENCFF604FPV 333 bp overlap
ATF7 2 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 287 bp overlap
ChIP K562 ENCFF308SKS 380 bp overlap
BRD4 3 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 178 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 280 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 311 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 269 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 408 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 282 bp overlap
ChIP BLaER1 ENCFF460KDD 408 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 109 bp overlap
ChIP K562 ENCFF136LTS 322 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 120 bp overlap
ChIP K562 ENCFF006PJY 245 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 196 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 152 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 150 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 154 bp overlap
ChIP K562 ENCFF544PCK 220 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 280 bp overlap
ChIP DE DE-GATA4-2 346 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 161 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 328 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 369 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 358 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 281 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 408 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 344 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 285 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 312 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 194 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 235 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 371 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 112 bp overlap
ChIP K-562 ENCSR000EZT.JUN.K-562 139 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 154 bp overlap
JUND 3 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 158 bp overlap
ChIP K562 ENCFF336RCR 326 bp overlap
ChIP K562 ENCFF830LVJ 183 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 345 bp overlap
ChIP K562 ENCFF320EQC 408 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 134 bp overlap
MED1 2 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 163 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 347 bp overlap
MEF2A 2 datasets
ChIP K-562 ENCSR000BNV.MEF2A.K-562 164 bp overlap
ChIP K562 ENCFF903PRO 99 bp overlap
MEF2D 2 datasets
ChIP K-562 ENCSR647ZXA.MEF2D.K-562 200 bp overlap
ChIP K562 ENCFF392LDT 247 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 104 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 327 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 408 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 257 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 251 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 408 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 408 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 352 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 346 bp overlap
ChIP K562 ENCFF316MCJ 344 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 142 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 408 bp overlap