chr1 : 165,941,712 165,942,536
824 bp 49 TFs 1 linked gene
This 824 bp open chromatin element is linked to ENSG00000271527 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000271527 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:165,936,712 – 165,947,536
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 1 dataset
ChIP myofibroblast GSE90772.AR.myofibroblast 73 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 94 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 58 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 101 bp overlap
BRD4 3 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 146 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 152 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 118 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 146 bp overlap
CTCF 2 datasets
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 80 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 115 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 199 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 143 bp overlap
ESR1 2 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 111 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 228 bp overlap
EZH2 9 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 240 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 285 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 165 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 170 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 177 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 217 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 156 bp overlap
ChIP neural progenitor cell ENCFF018MKA 529 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 147 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 169 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 71 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 564 bp overlap
ChIP DE DE-FOXA2-2 682 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 154 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 595 bp overlap
ChIP DE DE-GATA4-2 686 bp overlap
ChIP foregut GSE117136.GATA4.foregut 390 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 335 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 761 bp overlap
ChIP DE DE-GATA6-2 824 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 398 bp overlap
ChIP foregut GSE117136.GATA6.foregut 421 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 125 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 299 bp overlap
ISL2 1 dataset
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
MED1 1 dataset
ChIP LNCaP_Veh GSE125245.MED1.LNCaP_Veh 128 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 52 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 131 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 700 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 553 bp overlap
NOTCH1 1 dataset
ChIP HCC1599_GSI GSE116871.NOTCH1.HCC1599_GSI 87 bp overlap
Nkx3-1 1 dataset
Motif DE_72h DE_72h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_72h DE_72h-Nkx3-2_MA0122.4 10 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 183 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 221 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 165 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 201 bp overlap
POU2F1 2 datasets
Motif DE_72h DE_72h-POU2F1_MA0785.2 9 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 77 bp overlap
POU3F4 1 dataset
Motif DE_72h DE_72h-POU3F4_MA0789.1 9 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 120 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 364 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 334 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 138 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 157 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 154 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 824 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 215 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 104 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 139 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 125 bp overlap
STAT3 2 datasets
ChIP WA01 ERP004237.STAT3.WA01 134 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 112 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 228 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 70 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 70 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 155 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 112 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 132 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 81 bp overlap