chr1 : 159,831,699 159,832,143
444 bp 45 TFs 0 linked genes
This 444 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:159,826,699 – 159,837,143
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 183 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 205 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 312 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 313 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 398 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 358 bp overlap
EP300 3 datasets
ChIP neural ENCSR843ZUP.EP300.neural 434 bp overlap
ChIP neural cell ENCFF442QNK 404 bp overlap
ChIP neural cell ENCFF442QNK 355 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 251 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 370 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 444 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 444 bp overlap
FOXA1 2 datasets
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 241 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 444 bp overlap
FOXA2 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 291 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 113 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 65 bp overlap
ChIP DE DE-FOXA2-1 444 bp overlap
ChIP DE DE-FOXA2-2 444 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 218 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 373 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 139 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 444 bp overlap
ChIP DE DE-GATA4-1 421 bp overlap
ChIP DE DE-GATA4-2 426 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 200 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 444 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 444 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 444 bp overlap
ChIP DE DE-GATA6-2 411 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 373 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 276 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 361 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 303 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 308 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 392 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 295 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 444 bp overlap
GLI2 1 dataset
ChIP HEK293 ENCFF700EUN 305 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 372 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 256 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 371 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 409 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 125 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 309 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 387 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 389 bp overlap
ChIP hESC GSE18292.NANOG.hESC 266 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 349 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 100 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 262 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 215 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 160 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 376 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 321 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 320 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 238 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 328 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 376 bp overlap
ChIP neural cell ENCFF882LXX 444 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 111 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 320 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 234 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 199 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 346 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 304 bp overlap
TP53 1 dataset
ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 77 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 444 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 341 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 396 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 444 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 169 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 375 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 163 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 375 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 265 bp overlap
ZNF629 3 datasets
ChIP HEK293 ENCFF096ELQ 415 bp overlap
ChIP HEK293 ENCFF096ELQ 355 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 363 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 364 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 408 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 232 bp overlap