chr7 : 131,795,009 – 131,795,742

733 bp 57 TFs 1 linked gene

This 733 bp open chromatin element is linked to PODXL and is bound by 57 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
PODXL		238.7 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 168 bp overlap

CTCF 2 datasets

Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap

Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap

ELK1::SREBF2 1 dataset

Motif DE_36h DE_36h-ELK1SREBF2_MA1933.2 15 bp overlap

EOMES 2 datasets

Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 708 bp overlap

EP300 1 dataset

ChIP neural ENCSR843ZUP.EP300.neural 360 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 626 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH2 3 datasets

ChIP A-1847 GSE95643.EZH2.A-1847 199 bp overlap

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 354 bp overlap

ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 180 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 611 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 702 bp overlap

ChIP DE DE-FOXA2-2 666 bp overlap

FOXD2 1 dataset

Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap

FOXE1 1 dataset

Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 646 bp overlap

ChIP DE DE-GATA4-2 710 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 699 bp overlap

ChIP DE DE-GATA6-2 677 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 621 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 322 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 706 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 664 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 659 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 645 bp overlap

HOXB4 1 dataset

Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap

Hnf1A 1 dataset

Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 572 bp overlap

KLF4 1 dataset

Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap

MGA 1 dataset

Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap

MYCN 1 dataset

ChIP CHP-134 GSE129588.MYCN.CHP-134 208 bp overlap

NCOR1 1 dataset

ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 212 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 443 bp overlap

NFATC3 1 dataset

Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 221 bp overlap

Nfatc1 1 dataset

Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap

PAX7 1 dataset

ChIP H9_DOX GSE98976.PAX7.H9_DOX 203 bp overlap

PBX3 1 dataset

ChIP GM12878 ENCSR000BGR.PBX3.GM12878 122 bp overlap

PHOX2B 1 dataset

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 330 bp overlap

POU6F1 1 dataset

Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap

POU6F2 1 dataset

Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 440 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 530 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 357 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 364 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 497 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 680 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 707 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 312 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 584 bp overlap

SPIB 1 dataset

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

SPIC 1 dataset

Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap

SREBF2 1 dataset

Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap

Spi1 1 dataset

Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap

Spz1 1 dataset

Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 303 bp overlap

TBR1 1 dataset

Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap

TBX18 1 dataset

Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap

TBX20 1 dataset

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

TBX21 1 dataset

Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap

TCF7L1 1 dataset

Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap

Tbx6 1 dataset

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

ZNF140 1 dataset

Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap

ZNF28 1 dataset

ChIP HEK293T GSE78099.ZNF28.HEK293T 171 bp overlap

ZNF282 1 dataset

Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap

ZNF384 1 dataset

Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap

ZNF701 1 dataset

Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap